DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18284 and Lip1

DIOPT Version :10

Sequence 1:NP_609428.1 Gene:CG18284 / 34460 FlyBaseID:FBgn0043825 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_523540.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster


Alignment Length:420 Identity:154/420 - (36%)
Similarity:217/420 - (51%) Gaps:38/420 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SQIQSQ---GTSQSQSQAQIQSQPE------PRSCLQCQQASYQQFFAEVDIQIDAKLETPKMIS 104
            |:||.|   |....:.:.:.:.:.|      |...||           ..:|:.|:.|...|:|:
  Fly    20 SRIQGQLIGGEEDEEDEEEEEEEEESVEDETPEDRLQ-----------RKNIKQDSTLSVDKLIA 73

  Fly   105 KYGHQVETHYAFTADGYKLCLHRIPRSGATPVLLVHGLMASSATWVQFGPSQGLAYILSQSGYDV 169
            |||::.|.|:..|.|||.|.:|||.:.||.|.||.|||:.|||.:|..||:..|||:|:...|||
  Fly    74 KYGYESEVHHVTTEDGYILTMHRIRKQGAPPFLLQHGLVDSSAGFVVMGPNVSLAYLLADHNYDV 138

  Fly   170 WMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILLQTKMPSIQYIGHSQGSTAF 234
            |:.|.|||.||.........:..|||||:||||.|||||.||.:|..|..|.:.|.|||||.|:|
  Fly   139 WLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVLKVTGFPKLHYAGHSQGCTSF 203

  Fly   235 FVMCSERPEYAGKISLMQSLSPSVYMEGTRS-PALKFMKLFSGGFTMLLNLLGGHKISLKNKIVD 298
            |||||.||.|..|:..||:|:|:||.:.|.. |.::.:.|:       .|.|.|      :.|.:
  Fly   204 FVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRAISLY-------FNSLVG------SSIRE 255

  Fly   299 MFRNH---ICTKLIPS-RICAIFEFVVCGFNFNSFNMTLSPILEGHASQGSSAKQIYHFAQLQGN 359
            ||...   :|.....: |:|....|.:.|.|:|.||..:.|::.||...|.:|||:.||.|:..:
  Fly   256 MFNGEFRFLCRMTEETERLCIEAVFGIVGRNWNEFNRKMFPVILGHYPAGVAAKQVKHFIQIIKS 320

  Fly   360 SAFQKYDYGLILNKIRYQSIFPPLYNLSLALGKVALHRGDGDWLGSESDVLRLERDLPNCIENRN 424
            ..|..|.|....|...|:...||.|||||......::....|.|....||..:..||.|......
  Fly   321 GRFAPYSYSSNKNMQLYRDHLPPRYNLSLVTVPTFVYYSTNDLLCHPKDVESMCDDLGNVTGKYL 385

  Fly   425 IRFEGFSHFDFTISKDVRSLVYDRVISLCG 454
            :..:.|:|.||..:.|||.::|.|::.:.|
  Fly   386 VPQKEFNHMDFLWAIDVRKMLYRRMLQVLG 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18284NP_609428.1 PLN02872 101..450 CDD:215470 141/353 (40%)
Lip1NP_523540.1 PLN02872 70..412 CDD:215470 141/354 (40%)

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