DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18284 and Lipo1

DIOPT Version :10

Sequence 1:NP_609428.1 Gene:CG18284 / 34460 FlyBaseID:FBgn0043825 Length:457 Species:Drosophila melanogaster
Sequence 2:XP_006231364.1 Gene:Lipo1 / 294097 RGDID:1565682 Length:397 Species:Rattus norvegicus


Alignment Length:370 Identity:111/370 - (30%)
Similarity:175/370 - (47%) Gaps:32/370 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 ISKYGHQVETHY-AFTADGYKLCLHRIPR-----SGATPVLLV---HGLMASSATWVQFGPSQGL 158
            |.||.:.....| ..|.|||.|.::|||.     :.:.|.::|   |||.::...||...|...|
  Rat    36 IIKYWNYPSLEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLFSTPGVWVANPPDNSL 100

  Fly   159 AYILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILLQTKMPSIQ 223
            |:||:::|||||:.|:||:.::::.:......:.||.|||.::..|||||.|:.||..|....|.
  Rat   101 AFILAEAGYDVWLGNSRGSTWAKKHVTLSPDSEEFWAFSFDQMIAYDLPATINFILNTTGQEQIY 165

  Fly   224 YIGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKLFSGGFTMLL------ 282
            |||||.|:.......|...|.|.||.|...::|      .|:  :|::|    ||..||      
  Rat   166 YIGHSLGTLIALGAFSTNQELAEKIKLNILIAP------VRT--VKYVK----GFGRLLAYFSPE 218

  Fly   283 --NLLGGHKISLKNKIVDMFRNHICTKLIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGS 345
              .|:.|.|..|...:...:..::|...:....||.....:.||:.:..|.:...:...|:..|:
  Rat   219 AFKLVFGKKEFLPTVVFSEYSKYVCNIKLVDAGCAGVLGSLTGFSEDQLNTSRIDVYITHSLAGT 283

  Fly   346 SAKQIYHFAQLQGNSAFQKYDYGL-ILNKIRYQSIFPPLYNLSLALGKVALHRGDGDWLGSESDV 409
            |.:.:.|..|...:..||.||:|. .||...|....||||::........:..|..|:|....||
  Rat   284 STQILIHAGQAIRSGEFQAYDWGSPSLNMQHYNQTTPPLYSVENMKVPTVMFTGLKDFLADPKDV 348

  Fly   410 LRLERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVISLCG 454
            ..|...:.|.|.::.|  ..|||.||.:..:.::.|.|.::::.|
  Rat   349 ANLVPKIFNLIYHKTI--PEFSHLDFIVGLNAKTEVSDEILTILG 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18284NP_609428.1 PLN02872 101..450 CDD:215470 110/364 (30%)
Lipo1XP_006231364.1 PLN02872 34..387 CDD:215470 110/364 (30%)

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