DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18284 and Lipa

DIOPT Version :10

Sequence 1:NP_609428.1 Gene:CG18284 / 34460 FlyBaseID:FBgn0043825 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_036864.3 Gene:Lipa / 25055 RGDID:3008 Length:397 Species:Rattus norvegicus


Alignment Length:369 Identity:125/369 - (33%)
Similarity:192/369 - (52%) Gaps:16/369 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DAKLETPKMISKYGHQVETHYAFTADGYKLCLHRIPR-------SGATPVL-LVHGLMASSATWV 150
            :|.:...::|..:|:..|.|...|.|||.|.:||||.       .|..||: |.||.:|.|:.||
  Rat    30 EANMNVTEIIMHWGYPGEEHSVQTGDGYILGVHRIPHGRKNQFDKGPKPVVYLQHGFLADSSNWV 94

  Fly   151 QFGPSQGLAYILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILL 215
            ....:..|.:||:.:|:||||.|:|||.:|.:......|...:|.|||.|:.:|||||:|:.||.
  Rat    95 TNIDNNSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEYWAFSFDEMAKYDLPASINYILN 159

  Fly   216 QTKMPSIQYIGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKLFSGGFTM 280
            :|....:.|:|||||.|..|:..|:.||.|.|:.:..:|:|.:.:.....|.:|..:|..    :
  Rat   160 KTGQEQLYYVGHSQGCTIGFIAFSQMPELAKKVKMFFALAPVLSLNFASGPMVKLGRLPD----L 220

  Fly   281 LLNLLGGHKISL-KNKIVDMFRNHICTKLIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQG 344
            ||..|.|.|..| ::.:|.....||||.:|...:||...|::||||..:.||:...:...|...|
  Rat   221 LLEDLFGQKQFLPQSAMVKWLSTHICTHVIMKELCANIFFLICGFNEKNLNMSRVDVYTTHCPAG 285

  Fly   345 SSAKQIYHFAQLQGNSAFQKYDYGLI-LNKIRYQSIFPPLYNLSLALGKVALHRGDGDWLGSESD 408
            :|.:.:.|:.|:......|.:|:|.. .|...|...:||||::.......||..|..|||...||
  Rat   286 TSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYNQSYPPLYSIKDMQLPTALWSGGKDWLADTSD 350

  Fly   409 VLRLERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVISL 452
            :..|..::|..:.::||  ..:.|.||....|....:|:.|:||
  Rat   351 INILLTEIPTLVYHKNI--PEWDHLDFIWGLDAPWRLYNEVVSL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18284NP_609428.1 PLN02872 101..450 CDD:215470 121/358 (34%)
LipaNP_036864.3 PLN02872 7..394 CDD:215470 125/369 (34%)

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