DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31872 and Lipo4

DIOPT Version :10

Sequence 1:NP_723603.1 Gene:CG31872 / 34458 FlyBaseID:FBgn0051872 Length:1073 Species:Drosophila melanogaster
Sequence 2:NP_001310315.1 Gene:Lipo4 / 628236 MGIID:3779637 Length:398 Species:Mus musculus


Alignment Length:368 Identity:107/368 - (29%)
Similarity:181/368 - (49%) Gaps:15/368 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   711 DAKLDTPKMISKYGHQAETHYAFTADGYKLCLHRIPR-----SGATPVLLV---HGLMASSDTWV 767
            :|.::..::|..:.:.:|.:...|.|||.|.::|||.     :.:.|.::|   |||:|:...||
Mouse    28 EAHMNVSQIIKHWEYPSEEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLLATPGAWV 92

  Fly   768 QFGPSQGLAYILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILL 832
            ...|...||:||:.:||||||.::||:.::::.:......|.||||||.::.:|||||.|:.||.
Mouse    93 SNLPDNSLAFILADAGYDVWMGSSRGSTWAKKHVTLNTDSKEFWDFSFDQMIKYDLPATINFILD 157

  Fly   833 QTKMPSIQYIGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKVLQGGFTM 897
            :|....|.|||||||:.......:...:.|.||.|...|:|...::.::..| :....|.   ..
Mouse   158 KTGQKQIYYIGHSQGTLIAIGAFATNQKLAEKIKLNILLAPIYSVQHSKGIA-RLTSYLT---PT 218

  Fly   898 LLNLLGGHKISLKNRIVDMFRNHICNKLIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGS 962
            .:.:|.|.|..|...:......::|:..:.:..||.....:.|::....||:...:.......|:
Mouse   219 TIKVLFGEKEFLPTVVSSEVGAYVCDINLVTAGCAAMIGSMGGYSPEQLNMSRLDVYVKLNLAGT 283

  Fly   963 SAKQIYHFAQLQGNSAFQKYDYG-LILNKIRYQSIFPPLYNLSLALGKVALHRGDGDWLGSESDV 1026
            |.|.:.|:.|::.:...|.||:| ..||...|....||:||:.......|:..|..|:|....||
Mouse   284 SVKILIHYNQIRRSGILQAYDWGSSSLNMQHYNQTTPPVYNVEDMKVPTAMFTGLKDFLSDPEDV 348

  Fly  1027 LRLERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVIDL 1069
            ..|:..:.|....:.|  ..||||||....:.|..|.:.::.:
Mouse   349 EILKPKIHNLTYLKTI--PDFSHFDFIWGLNAREEVSEEILTI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31872NP_723603.1 Smc <220..>485 CDD:440809
PLN02872 718..1067 CDD:215470 106/357 (30%)
Lipo4NP_001310315.1 PLN02872 34..391 CDD:215470 106/362 (29%)
Blue background indicates that the domain is not in the aligned region.

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