DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31872 and lipa

DIOPT Version :10

Sequence 1:NP_723603.1 Gene:CG31872 / 34458 FlyBaseID:FBgn0051872 Length:1073 Species:Drosophila melanogaster
Sequence 2:NP_001015847.2 Gene:lipa / 548564 XenbaseID:XB-GENE-952977 Length:409 Species:Xenopus tropicalis


Alignment Length:364 Identity:110/364 - (30%)
Similarity:178/364 - (48%) Gaps:12/364 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   711 DAKLDTPKMISKYGHQAETHYAFTADGYKLCLHRIPR------SGATPVL-LVHGLMASSDTWVQ 768
            :|.::..::|...|:.:|.:...|.|||.|.::|||.      .|..||: |.|||:|....||.
 Frog    44 EATMNISELIRYRGYPSEEYEVLTEDGYILSVNRIPHGVKYASEGPKPVVFLQHGLLADGSNWVT 108

  Fly   769 FGPSQGLAYILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILLQ 833
            ...:..|.:||:.:|||||:.|:|||.:|.:..:.....:.||.||:.|:.:.||||.:|.|..:
 Frog   109 NLENNSLGFILADAGYDVWIGNSRGNTWSRKHKSLSPDQEEFWAFSYDELAKKDLPAVVDFITKK 173

  Fly   834 TKMPSIQYIGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKVLQGGFTML 898
            |....|.|:|||||:|..|:..|..|:.|.||.:...|:|...::.::||..| :.||..  .::
 Frog   174 TGQEQIFYVGHSQGTTIAFIAFSSLPQLAKKIKMYFGLAPVATVKFSKSPLAK-LGVLPE--FLI 235

  Fly   899 LNLLGGHKISLKNRIVDMFRNHICNKLIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGSS 963
            ..|.|..:...:..::.....|.|...|...:|....|::.|||..:.||:...:...|...|:|
 Frog   236 EELFGKGEFLPQTYLITWLATHFCTHAIADELCGNIFFLLSGFNEKNLNMSRVNVYSSHCPAGTS 300

  Fly   964 AKQIYHFAQLQGNSAFQKYDYGLILNKIRYQSIFPPLYNLSLALGKVALHRGDGDWLGSESDVLR 1028
            .:.:.|:.|...:...:.:|:|...|.|.|....||.|::.......||..|..|||....||..
 Frog   301 VQNMLHWRQGVRSGELKAFDFGTKGNMIHYNQTTPPFYHVRDMTVPTALWTGGNDWLADRKDVAL 365

  Fly  1029 LERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVI 1067
            |...:.|.:.::.|  ..:.|.||....|....:|:.:|
 Frog   366 LLTQVSNLVYHKEI--PDWEHLDFIWGLDAPERMYNEII 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31872NP_723603.1 Smc <220..>485 CDD:440809
PLN02872 718..1067 CDD:215470 108/355 (30%)
lipaNP_001015847.2 PLN02872 50..409 CDD:215470 109/358 (30%)
Blue background indicates that the domain is not in the aligned region.

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