DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31872 and Lip3

DIOPT Version :10

Sequence 1:NP_723603.1 Gene:CG31872 / 34458 FlyBaseID:FBgn0051872 Length:1073 Species:Drosophila melanogaster
Sequence 2:NP_477331.1 Gene:Lip3 / 41643 FlyBaseID:FBgn0023495 Length:394 Species:Drosophila melanogaster


Alignment Length:361 Identity:133/361 - (36%)
Similarity:192/361 - (53%) Gaps:8/361 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   715 DTPKMISKYGHQAETHYAFTADGYKLCLHRIPRSGAT------PV-LLVHGLMASSDTWVQFGPS 772
            |..:.|...|:..|.|...|:|.|.|.:||||.|..|      || .|:||:::||..||..||.
  Fly    27 DCGERIEDDGYPMERHEVVTSDNYILTMHRIPYSPKTGESSNRPVAFLMHGMLSSSSDWVLMGPE 91

  Fly   773 QGLAYILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILLQTKMP 837
            :.|||:|:.:||||||.|.|||.||:.........:|||:||::|||.||:||.||.:|.:|...
  Fly    92 RSLAYMLADAGYDVWMGNARGNTYSKAHKYWPTYWQIFWNFSWNEIGMYDVPAMIDYVLAKTGQQ 156

  Fly   838 SIQYIGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKVLQGGFTMLLNLL 902
            .:||:|||||:|.:.||.||||||..||.....|.|:.||...:||..:....:.|....::.:.
  Fly   157 QVQYVGHSQGTTVYLVMVSERPEYNDKIKSAHLLGPAAYMGNMKSPLTRAFAPILGQPNAIVEVC 221

  Fly   903 GGHKISLKNRIVDMFRNHICNKLIP-SRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGSSAKQ 966
            |..:....|:........:|....| :.:||...|::.|::....:..|...::..:..|:|..|
  Fly   222 GSMEFMPSNKFKQDLGIEMCQATSPYADMCANEIFLIGGYDTEQLDYELLEHIKATSPAGASVNQ 286

  Fly   967 IYHFAQLQGNSAFQKYDYGLILNKIRYQSIFPPLYNLSLALGKVALHRGDGDWLGSESDVLRLER 1031
            ..||.|...:..|:|:||..:.|...|.|.|||.|.|..|...|.|:.|..||:...|||.:|..
  Fly   287 NLHFCQEYNSGKFRKFDYTALRNPYEYGSYFPPDYKLKNAKAPVLLYYGANDWMCDVSDVRKLRD 351

  Fly  1032 DLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVI 1067
            :|||...:..:.||.::|.||....:.|..|||.|:
  Fly   352 ELPNMALDYLVPFEKWAHLDFIWGTEARKYVYDEVL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31872NP_723603.1 Smc <220..>485 CDD:440809
PLN02872 718..1067 CDD:215470 131/356 (37%)
Lip3NP_477331.1 PLN02872 26..392 CDD:215470 133/361 (37%)
Blue background indicates that the domain is not in the aligned region.

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