DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31872 and Lipo3

DIOPT Version :10

Sequence 1:NP_723603.1 Gene:CG31872 / 34458 FlyBaseID:FBgn0051872 Length:1073 Species:Drosophila melanogaster
Sequence 2:NP_001013792.2 Gene:Lipo3 / 381236 MGIID:2147592 Length:399 Species:Mus musculus


Alignment Length:376 Identity:109/376 - (28%)
Similarity:179/376 - (47%) Gaps:31/376 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   711 DAKLDTPKMISKYGHQAETHYAFTADGYKLCLHRIPR-----SGATPVLLV---HGLMASSDTWV 767
            :|.::..::|..:.:.:|.:...|.|||.|.::|||.     :.:.|.::|   |||:|:...||
Mouse    28 EAHMNVSEIIKHWDYPSEEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLLATPGAWV 92

  Fly   768 QFGPSQGLAYILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILL 832
            ...|...||:||:.:||||||.::||:.::::.:|.....|.||||||.::.:|||||.|:.||.
Mouse    93 SNPPVNSLAFILADAGYDVWMGSSRGSTWAKKHVALNPDSKEFWDFSFDQMIKYDLPATINFILD 157

  Fly   833 QTKMPSIQYIGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKVLQGGFTM 897
            :|....|.|||||||:.......:.....|.||.|...|:|...::.::            |.:.
Mouse   158 KTGQKQIYYIGHSQGTLLAIGAFATNQTLAEKIKLNILLAPIYSVQHSK------------GISH 210

  Fly   898 L--------LNLLGGHKISLKNRIVDMFRNHICNKLIPSRICAIFEFVVCGFNFNSFNMTLSPIL 954
            |        :.||.|.|......:.......:||....:.|||.....:.|::.:..|.:...:.
Mouse   211 LASYLTPTTIKLLFGEKEFFPTVVFSEVGACVCNINFFTAICAAIMGSMGGYSPDQLNKSRLDVY 275

  Fly   955 EGHASQGSSAKQIYHFAQLQGNSAFQKYDYGL-ILNKIRYQSIFPPLYNLSLALGKVALHRGDGD 1018
            ......|:|.|.:.|:.|:..:...|.||:|. .||...|....||:||:.......|:..|..|
Mouse   276 VKLNLAGTSVKVLIHYNQVGRSGILQAYDWGSPSLNMQHYNQTTPPVYNVEDMKVPTAMFTGLKD 340

  Fly  1019 WLGSESDVLRLERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVIDL 1069
            :|....||..|:..:.|....:.|  ..||||||.:..:.|..|.:.::.:
Mouse   341 FLSDPEDVEILKPKIHNLTYLKTI--PDFSHFDFILGLNARKEVSEEILTI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31872NP_723603.1 Smc <220..>485 CDD:440809
PLN02872 718..1067 CDD:215470 108/365 (30%)
Lipo3NP_001013792.2 PLN02872 34..391 CDD:215470 108/370 (29%)
Blue background indicates that the domain is not in the aligned region.

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