DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31872 and Lip4

DIOPT Version :10

Sequence 1:NP_723603.1 Gene:CG31872 / 34458 FlyBaseID:FBgn0051872 Length:1073 Species:Drosophila melanogaster
Sequence 2:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster


Alignment Length:398 Identity:163/398 - (40%)
Similarity:232/398 - (58%) Gaps:23/398 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   673 DQGPKFDDDLDEQPAPRSCSQCQKASYPQYITEVDIEIDAKLDTPKMISKYGHQAETHYAFTADG 737
            |...:.::|:|.                      :|:.|:.|:|..:|.|||:.||.|...|.||
  Fly    64 DSNVRLENDVDP----------------------NIQEDSHLNTYSLIKKYGYPAENHTLETDDG 106

  Fly   738 YKLCLHRIPRSGATPVLLVHGLMASSDTWVQFGPSQGLAYILSQSGYDVWMLNTRGNVYSEERLA 802
            |.|.||||.|.|||||||||||:.||.|||..||::||.|:|...||||||.|.|||.||.:.:.
  Fly   107 YILTLHRIARPGATPVLLVHGLLDSSATWVMMGPNKGLGYLLYDQGYDVWMANVRGNTYSRKHVK 171

  Fly   803 GRESDKIFWDFSFHEIGQYDLPAAIDLILLQTKMPSIQYIGHSQGSTAFFVMCSERPEYAGKISL 867
            .......||||:|||:|::|:||.:|.||..|.:..:.|||||||:..|::|.||:|||..||.|
  Fly   172 YSTHHAKFWDFTFHEMGKHDIPATMDYILNSTGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIIL 236

  Fly   868 MQSLSPSVYMEGTRSPALKFMKVLQGGFTMLLNLLGGHKISLKNRIVDMFRNHICNK-LIPSRIC 931
            ||.|:|..:::..|||.:.|:.......:::|.|:|.|:...||..:.||...||:: .|...||
  Fly   237 MQGLAPVAFLKHCRSPVVNFLAEWHLSVSLVLKLIGVHEFLPKNEFISMFNRIICDETTITKEIC 301

  Fly   932 AIFEFVVCGFNFNSFNMTLSPILEGHASQGSSAKQIYHFAQLQGNSAFQKYDYGLILNKIRYQSI 996
            :...|:..||:....|.|:.|::.||:..|:|.||:.||.||..:..|::||:|.:.|...|.:|
  Fly   302 SNVIFLTTGFDKLQLNETMLPVIVGHSPAGASTKQMQHFGQLNRSGGFRQYDHGWLRNHWIYGTI 366

  Fly   997 FPPLYNLSLALGKVALHRGDGDWLGSESDVLRLERDLPNCIENRNIRFEGFSHFDFTISKDVRSL 1061
            .||.|:|.....||||:.|..|||....||..|.|.|||.:|...:..:.|:|.||....|.|.|
  Fly   367 DPPSYHLENVRAKVALYYGQNDWLAPPEDVEMLNRKLPNVVEKYLVDDKEFNHLDFIWGIDAREL 431

  Fly  1062 VYDRVIDL 1069
            ::||::::
  Fly   432 LWDRMLEI 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31872NP_723603.1 Smc <220..>485 CDD:440809
PLN02872 718..1067 CDD:215470 156/349 (45%)
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 156/352 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.