DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trim9 and FSD1L

DIOPT Version :9

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_011517379.1 Gene:FSD1L / 83856 HGNCID:13753 Length:547 Species:Homo sapiens


Alignment Length:574 Identity:126/574 - (21%)
Similarity:212/574 - (36%) Gaps:163/574 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 SQYCLS-----CKAPAC----GLCIGELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTE 318
            |:||..     ....||    .:.||.        :|||:    |:..|...:..|:.|......
Human    10 SKYCFKENENVTVDKACFLISNITIGP--------ESINL----QQEALQRIISTLANKNDEIQN 62

  Fly   319 FI----QRLKGMSDKVTESCMEFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQQS 379
            ||    ..|||:.:..:....|.:.    :.::|...:.:.:|.::..|:.::..|.:.|:.|.|
Human    63 FIDTLHHTLKGVQENSSNILSELDE----EFDSLYSILDEVKESMINCIKQEQARKSQELQSQIS 123

  Fly   380 NCTGKLQQTTGLIQFCIEALKETDSAAFLQVGSMLINRVTNTDMTWHQEVTNA-----APRVSP- 438
            .|...|:.:..|::|...:|...:...|.:....:.:|||         :.:|     .|:||. 
Human   124 QCNNALENSEELLEFATRSLDIKEPEEFSKAARQIKDRVT---------MASAFRLSLKPKVSDN 179

  Fly   439 IVDLTLDDAALARAIDNLNFIQMRAVKDGDERCPAAPMTPTILPSDCSAENNSVTVAWQ-PPNHS 502
            :..|.:|.:...:.:..|.|:.:             |..|.|.|.:|...:|||||||: |...:
Human   180 MTHLMVDFSQERQMLQTLKFLPV-------------PKAPEIDPVECLVADNSVTVAWRMPEEDN 231

  Fly   503 FVEGYVLE--------------------LDDGSGGEFREVYCGKETICTVDGLHFNSMY-NARVK 546
            .::.::||                    :|:..|.|:           |:.||.|:|.| |.||:
Human   232 KIDHFILEHRKTNFDGLPRVKDERCWEIIDNIKGTEY-----------TLSGLKFDSKYMNFRVR 285

  Fly   547 AFNSAGEGEYSELIGLQTAE--------------------VAWFTFDPVLSGGAGSGLIFSKNNA 591
            |.|.|..||||:.:.|:|..                    |.|   ||....|..|.:...:|..
Human   286 ACNKAVAGEYSDPVTLETKALNFNLDNSSSHLNLKVEDTCVEW---DPTGGKGQESKIKGKENKG 347

  Fly   592 TV--------------------------SVEGWEHR------VALGSVGFSRGVHYWEFTID--- 621
            :|                          :|.|...|      ..||......|.||||....   
Human   348 SVHVTSLKKHTRSGTPSPKRTSVGSRPPAVRGSRDRFTGESYTVLGDTAIESGQHYWEVKAQKDC 412

  Fly   622 -NYTADTDPAFGVARIDVARNKMLGKDEKSFAMYIDRQRSWFQHN--SIHERRVEG-GITTGSTI 682
             :|:.      |||...:.:...|||...|:.::::   :|.|:.  :.|..:|:. .:|....|
Human   413 KSYSV------GVAYKTLGKFDQLGKTNTSWCIHVN---NWLQNTFAAKHNNKVKALDVTVPEKI 468

  Fly   683 GVLLDLERHTLSFLVNEMPQGSVAFRDLY-GVFYPAVSINRGVTLTMHTAMDAP 735
            ||..|.:...|||......|...:|:..: ....|...:..| .|::.|.|..|
Human   469 GVFCDFDGGQLSFYDANSKQLLYSFKTKFTQPVLPGFMVWCG-GLSLSTGMQVP 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9_like_C-I 2..37 CDD:319490
zf-B_box 250..291 CDD:306989 7/36 (19%)
ClassIIa_HDAC_Gln-rich-N 298..420 CDD:330228 25/125 (20%)
FN3 472..564 CDD:238020 35/113 (31%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 47/233 (20%)
FSD1LXP_011517379.1 iSH2_PI3K_IA_R 42..168 CDD:304922 26/138 (19%)
FN3 203..303 CDD:238020 35/110 (32%)
SPRY_PRY_FSD1 308..522 CDD:293958 46/227 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24099
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.