| Sequence 1: | NP_001188786.1 | Gene: | Trim9 / 34453 | FlyBaseID: | FBgn0051721 | Length: | 740 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_686295.4 | Gene: | trim3a / 562489 | ZFINID: | ZDB-GENE-080522-4 | Length: | 774 | Species: | Danio rerio |
| Alignment Length: | 794 | Identity: | 132/794 - (16%) |
|---|---|---|---|
| Similarity: | 215/794 - (27%) | Gaps: | 321/794 - (40%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 LRCPTCKQLYANPVLLPCFHALCLGCALDIQTPYSPGSALPGAVNGAGAASAAGHNGLHGNGGGA 69
Fly 70 GGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVCCSNTSR 134
Fly 135 PVSYAGTGLLPGVGNVVAPPGAAYCLTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDRFCAREALR 199
Fly 200 CQMCETDPKVASLICEQCEIRYCDACRELTHPARGPLAKHTLVKPRGAAQQRESVCGEHE-ETLS 263
Fly 264 QYCLSCKAPACGLCIGELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTEFIQRLKGMSD 328
Fly 329 KVTESCMEFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQ-----------QSNCT 382
Fly 383 GKLQQTTGLIQFCIEALKETDSAAFLQVGSMLINRVTNTDMTWHQEVTNAAPRVSPIVDLTLDDA 447
Fly 448 ALARAIDNLNFI-----------------------QMRAV------KDGD-ERCPAAPMTPTILP 482
Fly 483 SDCSAENNSVTVAWQPPNHSFVEGYVLEL----------------------------------DD 513
Fly 514 ------------GSGGEFREVYCGKETICTVDGLHFNSMYNARVKAFNSAGE------------- 553
Fly 554 GEYSELIGLQTAEVAWFTFDPVLSGGAGSGLIFSKNNATVSV---EGWEHRVALGSVGFSRGVHY 615
Fly 616 WEFTIDNYTADTDPAFGVARIDVARNKMLGKDEKSFAMYIDRQRSWFQHNSIHERRVEGGITTGS 680
Fly 681 TIGVLLDLERHTLS 694 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Trim9 | NP_001188786.1 | RING-HC_TRIM9_like_C-I | 2..37 | CDD:319490 | 12/31 (39%) |
| zf-B_box | 250..291 | CDD:306989 | 12/41 (29%) | ||
| ClassIIa_HDAC_Gln-rich-N | 298..420 | CDD:330228 | 27/132 (20%) | ||
| FN3 | 472..564 | CDD:238020 | 25/150 (17%) | ||
| SPRY_PRY_TRIM67_9 | 561..735 | CDD:293947 | 26/137 (19%) | ||
| trim3a | XP_686295.4 | RING | 27..70 | CDD:238093 | 19/160 (12%) |
| BBOX | 118..159 | CDD:197662 | 12/41 (29%) | ||
| BBC | 166..291 | CDD:128778 | 27/139 (19%) | ||
| IG_FLMN | 333..429 | CDD:214720 | 14/98 (14%) | ||
| Filamin | 333..423 | CDD:279024 | 14/92 (15%) | ||
| NHL_TRIM2_like | 481..774 | CDD:271330 | 30/157 (19%) | ||
| YncE | 496..>765 | CDD:225926 | 28/142 (20%) | ||
| NHL repeat | 499..538 | CDD:271330 | 9/52 (17%) | ||
| NHL repeat | 546..585 | CDD:271330 | 10/46 (22%) | ||
| NHL repeat | 588..625 | CDD:271330 | 4/15 (27%) | ||
| NHL repeat | 632..693 | CDD:271330 | |||
| NHL repeat | 699..741 | CDD:271330 | |||
| NHL repeat | 744..770 | CDD:271330 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||