Sequence 1: | NP_001188786.1 | Gene: | Trim9 / 34453 | FlyBaseID: | FBgn0051721 | Length: | 740 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001038379.1 | Gene: | trim8b / 559967 | ZFINID: | ZDB-GENE-030131-4325 | Length: | 564 | Species: | Danio rerio |
Alignment Length: | 486 | Identity: | 87/486 - (17%) |
---|---|---|---|
Similarity: | 151/486 - (31%) | Gaps: | 179/486 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MEDELRCPTCKQLYANPVLLPCFHALCLGCALDIQTPYSPGSALPGAVNGAGAASAAGHNGLHGN 65
Fly 66 GGGAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVCCS 130
Fly 131 NTSRPVSYAGTGLLPGVGNVVAPPGAAYCLTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDRFCAR 195
Fly 196 EALRCQMCETDPKVASLICEQCEIRYCDA--CRELTHPARGPLAKHTLVKPRGAAQQRESVCGEH 258
Fly 259 EETLSQYCLSCKAPACGLCIGE--LRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTEFIQ 321
Fly 322 RLKGMSDKVTESCMEFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQ 386
Fly 387 QTTGLIQFCIEALKETDSAAFLQVGSMLINRVTNTDMTWHQEVTNAAPRVSPIVDLTLDDAALAR 451
Fly 452 AIDNLNFIQ----MRAVKDGDERCPAAPMTP 478 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Trim9 | NP_001188786.1 | RING-HC_TRIM9_like_C-I | 2..37 | CDD:319490 | 14/34 (41%) |
zf-B_box | 250..291 | CDD:306989 | 9/42 (21%) | ||
ClassIIa_HDAC_Gln-rich-N | 298..420 | CDD:330228 | 23/121 (19%) | ||
FN3 | 472..564 | CDD:238020 | 1/7 (14%) | ||
SPRY_PRY_TRIM67_9 | 561..735 | CDD:293947 | |||
trim8b | NP_001038379.1 | RING | 15..55 | CDD:302633 | 16/70 (23%) |
PHA02277 | <196..279 | CDD:107164 | 24/126 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |