DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trim9 and TRIM36

DIOPT Version :9

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_016865110.1 Gene:TRIM36 / 55521 HGNCID:16280 Length:745 Species:Homo sapiens


Alignment Length:826 Identity:183/826 - (22%)
Similarity:308/826 - (37%) Gaps:198/826 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDELRCPTCKQLYANPVLLPCFHALCLGCALDIQTPYSPGSALPGAVNGAGAASAAGHNGLHGN 65
            :|.||.||.||:|:.:|::|||.|::|..|..::..      .|..:.|..|:.:          
Human    27 IERELICPACKELFTHPLILPCQHSICHKCVKELLL------TLDDSFNDVGSDN---------- 75

  Fly    66 GGGAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVCCS 130
                        :|.:.|..|..|.|                  .|:.|:::          ..:
Human    76 ------------SNQSSPRLRLPSPS------------------MDKIDRIN----------RPA 100

  Fly   131 NTSRPVSYAG-TGLLPG-VGNVVAPPGAAYCLTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDRF- 192
            :..|.|.:.| ..||.| ..|.:.|....:  .||.|...|...:.|:..|.....:|.||:|: 
Human   101 SQRRSVGWRGHKKLLNGWKRNSLTPRTTVF--PCPGCEHDVDLGERGINGLFRNFTLETIVERYR 163

  Fly   193 ---CAREALRCQMCETDPKVASLICEQCEIRYCDACRELTHPARGPLAKHTLVKPRGAAQQRESV 254
               .|..|:.|.:|:..|:.::..|..|...||:.|.::.||.....|:|..|.|....:.:..:
Human   164 QAARAATAIMCDLCKPPPQESTKSCMDCSASYCNECFKIHHPWGTIKAQHEYVGPTTNFRPKILM 228

  Fly   255 CGEHE-ETLSQYCLSCKAPACGLCIGELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTE 318
            |.||| |.::.||..|:.|.|.||.....|..|.|.:::...|..|.:||.::..|..|......
Human   229 CPEHETERINMYCELCRRPVCHLCKLGGNHANHRVTTMSSAYKTLKEKLSKDIDYLIGKESQVKS 293

  Fly   319 FIQRLKGMSDKVTESC----MEFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQQS 379
            .|..| .:..|.|| |    .:.|.:.|  .|.|.:.:.:|:..:|:||...|..::...:.|..
Human   294 QISEL-NLLMKETE-CNGERAKEEAITH--FEKLFEVLEERKSSVLKAIDSSKKLRLDKFQTQME 354

  Fly   380 NCTGKLQQTTGLIQFCIEALKETDSAAFLQVGSMLINRVTNTDMTWHQEVTNAAPRVSPIVDLTL 444
            ...| |.:..||:.:..|.|||||.:.|:|....|..|:        |:.|.:.....|....:.
Human   355 EYQG-LLENNGLVGYAQEVLKETDQSCFVQTAKQLHLRI--------QKATESLKSFRPAAQTSF 410

  Fly   445 DDAAL-----ARAIDNLNFIQMRAVKDGDERCPAAPMTPTILPSDCSAENNSVTVAWQPPNHSFV 504
            :|..:     ...:..|:|.     ..|.:       .|.|........||:: :.|..|.....
Human   411 EDYVVNTSKQTELLGELSFF-----SSGID-------VPEINEEQSKVYNNAL-INWHHPEKDKA 462

  Fly   505 EGYVLEL------DDGSGGEFREVYCGKETICTVDGLHFNSMYNARVKAFNSAGEGEYSELIGLQ 563
            :.||||.      |:.|..|. || ||...|  :..|..:|.|..||:|:..:.....|..:.|.
Human   463 DSYVLEYRKINRDDEMSWNEI-EV-CGTSKI--IQDLENSSTYAFRVRAYKGSICSPCSRELILH 523

  Fly   564 T--AEVAWFTFDPVLSGGAGSGLIFSKNNATVSVEGWEHRVA---------------LGSVGFSR 611
            |  |.|..|.||..........|:..|.:...|..|:...:|               :|..|.::
Human   524 TPPAPVFSFLFDEKCGYNNEHLLLNLKRDRVESRAGFNLLLAAERIQVGYYTSLDYIIGDTGITK 588

  Fly   612 GVHYWEFTIDNYTADTDPAFGVARIDVARNKMLGKDEKSFAMYIDRQRSW-----------FQHN 665
            |.|:|.|.::.|:.       :.::.||.:              |:.:.|           ::.:
Human   589 GKHFWAFRVEPYSY-------LVKVGVASS--------------DKLQEWLRSPRDAVSPRYEQD 632

  Fly   666 SIHERRVEGG----------ITTG------------------------STIGVLLDLERHTLSFL 696
            |.|:...|..          :|.|                        ::||:.||.::..:.|.
Human   633 SGHDSGSEDACFDSSQPFTLVTIGMQKFFIPKSPTSSNEPENRVLPMPTSIGIFLDCDKGKVDFY 697

  Fly   697 VNEMPQGSVAFR---DLYGVFYPAVSINRGVTLTMHTAMDAPKMDY 739
              :|.|....:.   |.....|||.::.....:.:...:.|..::|
Human   698 --DMDQMKCLYERQVDCSHTLYPAFALMGSGGIQLEEPITAKYLEY 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9_like_C-I 2..37 CDD:319490 15/34 (44%)
zf-B_box 250..291 CDD:306989 15/41 (37%)
ClassIIa_HDAC_Gln-rich-N 298..420 CDD:330228 35/125 (28%)
FN3 472..564 CDD:238020 26/97 (27%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 39/238 (16%)
TRIM36XP_016865110.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I12120
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24099
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.010

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