DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trim9 and zgc:92594

DIOPT Version :10

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001002723.2 Gene:zgc:92594 / 436996 ZFINID:ZDB-GENE-040718-482 Length:437 Species:Danio rerio


Alignment Length:441 Identity:85/441 - (19%)
Similarity:130/441 - (29%) Gaps:167/441 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDELRCPTCKQLYANPVLLPCFHALCLGCALDIQTPYSPGSALPGAVNGAGAASAAGHNGLHGN 65
            :|:||.||.|..||.:|.||||.|..||.|...::                              
Zfish    11 LEEELTCPVCLDLYRDPHLLPCGHNFCLQCLRRLK------------------------------ 45

  Fly    66 GGGAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVCCS 130
                                           ..|..|.                           
Zfish    46 -------------------------------GRSERGR--------------------------- 52

  Fly   131 NTSRPVSYAGTGLLPGVGNVVAPPGAAYCLTCPLCR-------------KLVFFDDGGVRNLPTY 182
                                         |.||.||             ||....||..|.....
Zfish    53 -----------------------------LRCPECRQTHRCAAAWQKNFKLANITDGFRRRSQPE 88

  Fly   183 RAMEAIVDRFCAREALRCQMCE---TDPKVASLICEQCEIRYCDACRELTH-------PARGPLA 237
            |:.::..:...:|..::|..|.   .|...|...|.:||:..|.     ||       ||   ..
Zfish    89 RSTQSRSEPEHSRTEVQCDYCPAEGADGGKAVKTCLKCEVSMCP-----THVRPHLELPA---FR 145

  Fly   238 KHTLVKPRGAAQQRESVCGEHEETLSQYCLSCKAPACGLCIGELRHQAHDVQSINVTCK------ 296
            :|.||:|......|:  |.:|:|.|..||:..:...|..|..|..|..|.::::....|      
Zfish   146 EHPLVEPLADMSMRK--CSDHDEMLRYYCVDERLFLCNACTIEGTHSGHTIKTLKNAMKDLKAFL 208

  Fly   297 -AQKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALIQAIHD-RREYL 359
             .|:.:.|..|.::....:..||..:..|...|...:....|.....|..:..:.::.| ...|.
Zfish   209 DIQQHKTSRKLLKVERNKQEQTEIERHAKVYRDDTDQHLEAFRESSVAHLDGFLSSLRDSMSSYD 273

  Fly   360 LEAIRMDKDTKIRILKDQ---QSNCTG--KLQQTTGLIQFCIEALKETDSA 405
            .|.....:....||.:||   |...:|  :|||.:...||    :|:.:|:
Zfish   274 AEQSLGVQQNLSRISQDQSRLQEVRSGFQRLQQQSDAFQF----IKDYNSS 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238 17/32 (53%)
Bbox1_TRIM9-like_C-I 199..244 CDD:380861 15/54 (28%)
Bbox2_TRIM9-like 255..291 CDD:380822 11/35 (31%)
CC_brat-like 298..420 CDD:475168 25/114 (22%)
FN3 472..564 CDD:238020
SPRY_PRY_TRIM67_9 561..735 CDD:293947
zgc:92594NP_001002723.2 RING-HC_RNF180 13..71 CDD:438216 23/174 (13%)
Bbox1_TRIM8-like 105..152 CDD:380860 15/54 (28%)
Bbox2_TRIM8_C-V 158..198 CDD:380821 12/41 (29%)
Blue background indicates that the domain is not in the aligned region.

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