| Sequence 1: | NP_001188786.1 | Gene: | Trim9 / 34453 | FlyBaseID: | FBgn0051721 | Length: | 740 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038958566.1 | Gene: | Trim2 / 361970 | RGDID: | 1310981 | Length: | 809 | Species: | Rattus norvegicus |
| Alignment Length: | 720 | Identity: | 126/720 - (17%) |
|---|---|---|---|
| Similarity: | 232/720 - (32%) | Gaps: | 225/720 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 163 PLCRKLVFFDDGGVRNLPTYRAMEAIVDRFCAREALRCQMC---ETDPKVASLI---CEQCEIRY 221
Fly 222 ---------CDACRELT-HPARGPLA----------KHTLVKPRGAAQQRESV------------ 254
Fly 255 --CGEHEETLSQ-YCLSCKAPACGLCIGELRHQAHD-------VQSINVTCKAQKTELSHNLQQL 309
Fly 310 SEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRIL 374
Fly 375 KDQQSNCTGKLQQTTGLIQFCIEALK---ETDSAAFLQVGSMLINRVTNTDMTWHQEVTNAAPRV 436
Fly 437 SPIVDLTLDDAALARAIDNL------NFIQMRAVKDGD---ERCPAAPMTPTILPSD-----CSA 487
Fly 488 ENNSVTVAWQPPNHSFVEGYVLELDDGS-------------------------GGEFR-EVYCGK 526
Fly 527 ETICTVDGL----------HFN--------SMYNARVKAFN-------------SAGEGEYSELI 560
Fly 561 GLQTAEVAWFTFDPVLSGGAGSGLIFSKNNATVSVEGWEHRVALGSVGFSRGVHYWEFTIDNYTA 625
Fly 626 DTDPAFGVARIDVARNKMLGKDEKSFAMYI---------DRQRSW---FQHNSIHERRVEGGITT 678
Fly 679 GSTIGVLLDLERHTLSFLVNE--------MPQGSVAFR-------------DLYGVFYPAVSINR 722
Fly 723 GVTLT 727 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Trim9 | NP_001188786.1 | RING-HC_TRIM9_like_C-I | 2..37 | CDD:319490 | |
| zf-B_box | 250..291 | CDD:306989 | 13/62 (21%) | ||
| ClassIIa_HDAC_Gln-rich-N | 298..420 | CDD:330228 | 20/124 (16%) | ||
| FN3 | 472..564 | CDD:238020 | 27/153 (18%) | ||
| SPRY_PRY_TRIM67_9 | 561..735 | CDD:293947 | 32/200 (16%) | ||
| Trim2 | XP_038958566.1 | RAD18 | 68..>170 | CDD:227719 | 21/109 (19%) |
| RING-HC_TRIM2 | 81..126 | CDD:319681 | 12/44 (27%) | ||
| Bbox2_TRIM2_C-VII | 176..217 | CDD:380882 | 11/41 (27%) | ||
| BBC | 222..348 | CDD:128778 | 20/132 (15%) | ||
| IG_FLMN | 386..482 | CDD:214720 | 17/95 (18%) | ||
| NHL_TRIM2_like | 532..809 | CDD:271330 | 35/220 (16%) | ||
| NHL repeat | 550..589 | CDD:271330 | 14/82 (17%) | ||
| NHL repeat | 597..636 | CDD:271330 | 4/38 (11%) | ||
| NHL repeat | 639..675 | CDD:271330 | 8/38 (21%) | ||
| NHL repeat | 683..727 | CDD:271330 | 5/22 (23%) | ||
| NHL repeat | 736..776 | CDD:271330 | |||
| NHL repeat | 779..805 | CDD:271330 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||