DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trim9 and Trim67

DIOPT Version :9

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_006531202.1 Gene:Trim67 / 330863 MGIID:3045323 Length:770 Species:Mus musculus


Alignment Length:803 Identity:325/803 - (40%)
Similarity:451/803 - (56%) Gaps:112/803 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDELRCPTCKQLYANPVLLPCFHALCLGCA--LDIQTPYSPGSALPGAVNGAGAASAAGHNGLH 63
            ||:||:||.|..|:..|::|||.|.:||.||  :.:|||.......|..:...|||:||......
Mouse     1 MEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQHLPPPLLLSRGAAAAATPPDQD 65

  Fly    64 GNGGGAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVC 128
            ...|...|||.|......|.|                     .|...|.:||:|::||.|||.  
Mouse    66 AAAGATSGGAGANTAGGLGGG---------------------ATGGGDHADKLSLYSETDSGY-- 107

  Fly   129 CSNTSRPVSYAGTGLLPGVGNVVAPPGA-------AYC---------LTCPLCRKLVFFDDGGVR 177
            .|.|....|..|..:||   .|.||||:       |.|         :|||.|.:....|..|:|
Mouse   108 GSYTPSLKSPNGVRVLP---MVPAPPGSSAAAARGAACSSLCSSSSSITCPQCHRSASLDHRGLR 169

  Fly   178 NLPTYRAMEAIVDRF-----------CAREALRCQMCE-TDPKVASLICEQCEIRYCDACRELTH 230
            .....|.:|.||.|:           .|.....||:|: |.|:.|:.:||||::.||..|:...|
Mouse   170 GFQRNRLLEGIVQRYQQGRGVVPGAAAAPAVAICQLCDRTPPEPAATLCEQCDVLYCATCQLKCH 234

  Fly   231 PARGPLAKHTLVKP------------------------------RGAAQQRE-SVCGEHE-ETLS 263
            |:|||.|||.||:|                              .||:..|: ..|.||| |..|
Mouse   235 PSRGPFAKHRLVQPPPPPTPPEATPAVTGTSTASSAGGCRSPGGAGASAPRKFPTCPEHEMENYS 299

  Fly   264 QYCLSCKAPACGLCIGELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTEFIQRLKGMSD 328
            .||:||::|.|.:|:.|.||..|:|:.:..|.|..|.:||..|..:|:||:...||:.:||.:..
Mouse   300 MYCVSCRSPVCYMCLEEGRHSKHEVKPLGATWKQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQ 364

  Fly   329 KVTESCMEFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGLIQ 393
            ::.|:.:::|..:.|||:||:.|:..::..||..:..:::.|::::.||.::||.||:|:|||::
Mouse   365 QIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLME 429

  Fly   394 FCIEALKETDSAAFLQVGSMLINRVTNTDMTWHQEVTNA-APRVSPIVDLTLDDAALARAIDNLN 457
            :|:|.:||.|.:.|||:...||.||..:...|   |..| .|:||...|||||...|.:||..|:
Mouse   430 YCLEVIKEDDPSGFLQISDALIKRVQTSQEQW---VKGALEPKVSAEFDLTLDSEPLLQAIHQLD 491

  Fly   458 FIQMRAVKDGDERCPAAPMTPTILPSDCSAENNSVTVAWQPP--NHSFVEGYVLELDDGSGGEFR 520
            |:||        :|...|: |.:....|...|||||:||:.|  .||..|||:||||||.||:||
Mouse   492 FVQM--------KCRVPPV-PLLQLEKCCTRNNSVTLAWRTPPFTHSPAEGYILELDDGDGGQFR 547

  Fly   521 EVYCGKETICTVDGLHFNSMYNARVKAFNSAGEGEYSELIGLQTAEVAWFTFDPVLSGGAGSG-- 583
            |||.||||:||:|||||||.||||||||||:|.|.||:.:.|||::||||||||      .||  
Mouse   548 EVYVGKETLCTIDGLHFNSTYNARVKAFNSSGVGPYSKTVVLQTSDVAWFTFDP------NSGHR 606

  Fly   584 -LIFSKNNATVSVEGWEHRVALGSVGFSRGVHYWEFTIDNYTADTDPAFGVARIDVARNKMLGKD 647
             :|.|.:|.|.:...::.||.||:..||:||||||..:|.|....||||||||..|.::.|||||
Mouse   607 DIILSNDNQTATCSSYDDRVVLGTAAFSKGVHYWELHVDRYDNHPDPAFGVARASVVKDMMLGKD 671

  Fly   648 EKSFAMYIDRQRSWFQHNSIHERRVEGGITTGSTIGVLLDLERHTLSFLVNEMPQGSVAFRDLYG 712
            :|::|||:|..||||.|.:.|..|.|||:..|:|:||||||.:|||:|.:|...||..||..:.|
Mouse   672 DKAWAMYVDNNRSWFMHCNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQGPTAFSHVDG 736

  Fly   713 VFYPAVSINRGVTLTMHTAMDAP 735
            ||.||:|:||.|.:|:||.::.|
Mouse   737 VFMPALSLNRNVQVTLHTGLEVP 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9_like_C-I 2..37 CDD:319490 17/36 (47%)
zf-B_box 250..291 CDD:306989 19/42 (45%)
ClassIIa_HDAC_Gln-rich-N 298..420 CDD:330228 44/121 (36%)
FN3 472..564 CDD:238020 57/93 (61%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 89/176 (51%)
Trim67XP_006531202.1 RING-HC_TRIM67 2..>40 CDD:319672 18/37 (49%)
Bbox1_TRIM67_C-I 202..247 CDD:380902 22/44 (50%)
Bbox2_TRIM67_C-I 288..332 CDD:380885 19/43 (44%)
BBC 334..460 CDD:128778 44/125 (35%)
FN3 515..591 CDD:238020 53/75 (71%)
SPRY_PRY_TRIM67_9 588..759 CDD:293947 89/176 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 154 1.000 Domainoid score I4255
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 578 1.000 Inparanoid score I1027
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48085
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003096
OrthoInspector 1 1.000 - - otm43990
orthoMCL 1 0.900 - - OOG6_105047
Panther 1 1.100 - - LDO PTHR24099
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2070
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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