Sequence 1: | NP_001188786.1 | Gene: | Trim9 / 34453 | FlyBaseID: | FBgn0051721 | Length: | 740 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013977.1 | Gene: | Trim42 / 301106 | RGDID: | 1359699 | Length: | 723 | Species: | Rattus norvegicus |
Alignment Length: | 718 | Identity: | 133/718 - (18%) |
---|---|---|---|
Similarity: | 223/718 - (31%) | Gaps: | 259/718 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 DELRCPTCKQLYANPVLLPCFHALCLGCALDIQTPYSPGSALPGAVNGAGAASAAGHNGLHGNGG 67
Fly 68 GAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVCCSNT 132
Fly 133 SRPVSYAGTGLLPGVGNVVAPPGAAYCLTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDRFCAREA 197
Fly 198 ------------LRCQMCETDPKVASLICEQCEIRYCDACRELTHPARGPLAKHTLVKPRGAAQQ 250
Fly 251 RESVCGEHEET-LSQYCLSCKAPACGLCIGELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKAR 314
Fly 315 STTEFIQRLKGMSDKVTESCMEFERL---VHAQCEALIQAIHDRREYL-LEAIRMDKDTKIRILK 375
Fly 376 DQQSN---------------CTGKLQQTTGLIQFCIEALKETDSAAFLQVGSMLINRVTNTDMTW 425
Fly 426 HQEVTNA-AP----RVSPIVDLTLDDAALARAIDNLNFIQMRAVKDGDER-CPAAPMTPTILPSD 484
Fly 485 CSAENNSVTVAWQP--PNHSFVEGYVLEL-----------DDGSGGEFREVYCGKETIC---TVD 533
Fly 534 GLH-----------------FNSMYNARVKAFNSAGE-GEYSELIGLQTAEVAWFTFDPVLSGGA 580
Fly 581 GSGLIFSKNNATVSVEGWE-----------HRVALGSVGFSRGVHYWEFTIDNYTADTDPAFGVA 634
Fly 635 RID 637 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Trim9 | NP_001188786.1 | RING-HC_TRIM9_like_C-I | 2..37 | CDD:319490 | 13/33 (39%) |
zf-B_box | 250..291 | CDD:306989 | 12/41 (29%) | ||
ClassIIa_HDAC_Gln-rich-N | 298..420 | CDD:330228 | 36/140 (26%) | ||
FN3 | 472..564 | CDD:238020 | 20/125 (16%) | ||
SPRY_PRY_TRIM67_9 | 561..735 | CDD:293947 | 15/88 (17%) | ||
Trim42 | NP_001013977.1 | RING-HC_TRIM42_C-III | 143..193 | CDD:319492 | 20/162 (12%) |
Bbox_SF | 235..280 | CDD:412124 | 12/47 (26%) | ||
Bbox_SF | 287..326 | CDD:412124 | 11/39 (28%) | ||
Topo_C_assoc | <341..432 | CDD:421254 | 23/95 (24%) | ||
FN3 | 612..698 | CDD:238020 | 16/91 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |