DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trim9 and Trim31

DIOPT Version :10

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_666189.1 Gene:Trim31 / 224762 MGIID:2385051 Length:507 Species:Mus musculus


Alignment Length:526 Identity:107/526 - (20%)
Similarity:185/526 - (35%) Gaps:160/526 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LTCPLCRKL----VFFDDGGVRNLPTYRAMEAIVDRFCAREALRC--QMCETDPKVASLICEQCE 218
            :|||:|.::    |..|.|               ..||    |:|  |:.:|..|:      ||.
Mouse    14 VTCPICMEILQDPVTIDCG---------------HNFC----LQCISQVGKTSEKI------QCP 53

  Fly   219 IRYCDACRELTHPAR--GPLA-KHTLVKPRG-AAQQRESVCGEHEETLSQYCLSCKAPACGLCIG 279
            :......:....|.:  ..|| |...:.|.. .|::.:|.|..|:|.|..:|....|..|.:|..
Mouse    54 LCKLSVNKNTFRPNKLLASLAEKIQSMDPADIQAEKEDSRCQRHKEKLHYFCEQDGAFLCVVCRD 118

  Fly   280 ELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERL-VHA 343
            ...|::|:|..|:...:..|.::....|.|.:|.:...|..::.:| :.....:.::.|:| :|.
Mouse   119 SKDHKSHNVTLIDEAAQNYKVQIESQAQDLGQKDKKIIEEKKQGEG-AIWAFRAQVDLEKLKIHE 182

  Fly   344 QCEALIQAIHDRREYLLEAI--------------------------RMDKDTKIR-------ILK 375
            :.:.|.|.:.:...:||..:                          ::.|..|||       :||
Mouse   183 EFKLLRQRLDEEESFLLSRLDWLEQQGAKQLRQYVTVTEKQLNSLRKLTKSLKIRLQSSSMELLK 247

  Fly   376 D-QQSNCTGKLQQ-------TTGLIQFCIEA-------------LKE-------TDSAAFLQVGS 412
            | :.:...||..|       ...|.:.|.||             ||:       .|.:||:.   
Mouse   248 DIKDALSRGKEFQFLNPNPVPEDLEKKCSEAKARHESIIKTLTELKDDMNAEGKRDKSAFMN--- 309

  Fly   413 MLINRVTNTDMTWHQEVTNAAPRVSPIVDLTLDDAALARAIDNLNFIQ--------MRAVKDGDE 469
             .:|:......:..|:..:..|...|:   |||.::   |..:|.|.|        :.|.|..:.
Mouse   310 -SLNKEEKESWSLLQKNNSVLPTSVPV---TLDKSS---ADPDLTFSQDLKKVTLYIVAGKASNR 367

  Fly   470 RCPAAPMTPTILPSDC---SAENNSVTVAWQ-----PPNHSFVEGYVLELDDGSGGE--FREVY- 523
            :....|    ..|..|   |...:|....|:     |...:.:.|.|.||..|:..:  ..:.| 
Mouse   368 QAKPRP----FYPFHCVRGSPGLSSGRQVWEAEIRGPSGGACIVGVVTELARGAQSQTVSAQSYI 428

  Fly   524 ---------CGKETICTVD----------GLHFNS------MYNA----RVKAFNSAGEGEYSEL 559
                     |...|.|...          |::.|.      .|:|    .:..|.::.:|:...|
Mouse   429 WALRISPSGCQPFTNCKAQEYLQVCLKKVGVYVNHDCGEVVFYDAITSKHIYTFQTSFDGKVFPL 493

  Fly   560 IGLQTA 565
            .|||.|
Mouse   494 FGLQVA 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238
Bbox1_TRIM9-like_C-I 199..244 CDD:380861 10/49 (20%)
Bbox2_TRIM9-like 255..291 CDD:380822 11/35 (31%)
CC_brat-like 298..420 CDD:475168 33/183 (18%)
FN3 472..564 CDD:238020 25/131 (19%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 4/5 (80%)
Trim31NP_666189.1 rad18 3..>89 CDD:273165 22/99 (22%)
RING-HC_TRIM31_C-V 13..55 CDD:438244 16/65 (25%)
Bbox_SF 94..130 CDD:469587 11/35 (31%)
Cast <183..>330 CDD:431111 25/150 (17%)
SPRY 335..505 CDD:470632 36/175 (21%)
Blue background indicates that the domain is not in the aligned region.

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