DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trim9 and Trim25

DIOPT Version :10

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_033572.2 Gene:Trim25 / 217069 MGIID:102749 Length:634 Species:Mus musculus


Alignment Length:845 Identity:158/845 - (18%)
Similarity:258/845 - (30%) Gaps:337/845 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDELRCPTCKQLYANPVLLPCFHALCLGCALDIQTPYSPGSALPGAVNGAGAASAAGHNGLHGN 65
            :.:||.|..|.:|:..||..||.|..|:.| ||                                
Mouse     7 LAEELSCSVCLELFKEPVTTPCGHNFCMSC-LD-------------------------------- 38

  Fly    66 GGGAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVCCS 130
                                                                             
Mouse    39 ----------------------------------------------------------------- 38

  Fly   131 NTSRPVSYAGTGLLPGVGNVVAPPGAAYCLTCPLCRKLVFFDDGGVR-NLPTYRAMEAIVDRFCA 194
                     .|.::.|      ||     ..||.|||:.     .|| .|.....|.|:|::|..
Mouse    39 ---------ETWVVQG------PP-----YRCPQCRKVY-----QVRPQLQKNTVMCAVVEQFLQ 78

  Fly   195 REALR----------------------CQMCETDPKVASLICEQCEIRYC--------DACRELT 229
            .|..|                      |..|.|:  :|...|..|...:|        |:.....
Mouse    79 AEQARTPVDDWTPPARFSASSAATQVACDHCLTE--IAVKTCLVCMASFCQEHLRPHFDSPAFQD 141

  Fly   230 HPARGPLAKHTLVKPRGAAQQRESVCGEHEETLSQYCLSCKAPACGLCIGELRHQAHDVQSINVT 294
            ||.:.|:......|.....:.||..|.||.|     |:      |.:|:.|  |:         |
Mouse   142 HPLQSPIRDLLRRKCTQHNRLRELFCPEHGE-----CI------CHICLVE--HK---------T 184

  Fly   295 CKAQKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALIQAIHDRREYL 359
            |  ..|.||.....|..|.|:....:......:.|..|.....::.|....:..::.:  |:||:
Mouse   185 C--SPTTLSQASADLEYKLRNKLTIMHSHINGATKALEDVRSKQQCVQDSMKRKMEQL--RQEYM 245

  Fly   360 -LEAIRMDKDT-KIRILKDQQSNCTGK--------------LQQTTGLIQFCIEALKETDSAAFL 408
             ::|:....:| .:|.||:::....||              :|:....::..::   :.|...||
Mouse   246 EMKAVIDAAETSSLRKLKEEEKRVYGKFDTIYQVLVKKKSEMQKLKAEVELIMD---KGDEFEFL 307

  Fly   409 QVGSMLINRVTNTDMTWHQEVTNAAPRVSPIVDLTLD------------DAALARAIDNLNFIQM 461
            :..:.|....|.             |...|.:||..|            .:.|..:|..|   |.
Mouse   308 EKAAKLQGESTK-------------PVYIPKIDLDHDLIMGIYQGAADLKSELKHSIKKL---QK 356

  Fly   462 RAVK------DGDER----CPAAPMTPTILPSDCSAENNSVTVAWQPPNH-------SFVEGYVL 509
            ::.:      .||:.    .|..|...||.    ..:.....||..||:|       :|      
Mouse   357 KSEEHNGSGNKGDQTQSTFKPVQPSKKTIQ----EKKTKKTPVAPGPPSHFSPNKLPTF------ 411

  Fly   510 ELDDGSGGEFREVYCGKETICTVDGLHFNSMYNARVKAFNSAGEGEYSELIGL------------ 562
                |:.|:..:   .|.|           ..:|..||  ||.:   .:.:|:            
Mouse   412 ----GAPGQSLD---SKAT-----------SPDAAPKA--SAAQ---PDSVGVKAKVLENFLTKS 453

  Fly   563 QTAEVAWFT---FDPVLSGGAGSGLIFSKNNATVSV-EGWEH-----------RVALGSVGFSRG 612
            :|..:.:|.   ||   ...|.:.:..|....|.|| :|.:|           ...||...:..|
Mouse   454 RTELLEYFVKVIFD---YNTAHNKVSLSNKYTTASVSDGLQHYRSHPQRFTYCSQVLGLHCYKNG 515

  Fly   613 VHYWEFTI--DNYTADTDPAFGVARIDVAR---NKMLGKDEKSFAMYIDRQRSWFQ------HNS 666
            :||||..:  :|:.     ..|:....:.|   ...||::..|:.:      .||.      ||:
Mouse   516 IHYWEVELQKNNFC-----GVGICYGSMERQGPESRLGRNPNSWCV------EWFNNKISAWHNN 569

  Fly   667 IHERRVEGGITTGSTIGVLLDLER-HTLSFLVNEMPQGSVAFR-DLYGVFYPAVSI-NRGVTLTM 728
            : |:.:..  |..:.:||||:.:. ..:.|.|.|.......|: |.....|||..: :.|.||::
Mouse   570 V-EKTLPS--TKATRVGVLLNCDHGFVIFFAVTEKVHLMYKFKVDFTEALYPAFWVFSAGTTLSI 631

  Fly   729  728
            Mouse   632  631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238 14/32 (44%)
Bbox1_TRIM9-like_C-I 199..244 CDD:380861 12/74 (16%)
Bbox2_TRIM9-like 255..291 CDD:380822 9/35 (26%)
CC_brat-like 298..420 CDD:475168 24/137 (18%)
FN3 472..564 CDD:238020 20/110 (18%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 46/209 (22%)
Trim25NP_033572.2 RING-HC_TRIM25_C-IV 6..75 CDD:438259 29/190 (15%)
Bbox1_TRIM25-like_C-IV 105..151 CDD:380900 11/47 (23%)
Bbox2_TRIM25_C-IV 154..190 CDD:380834 15/59 (25%)
PTZ00121 <217..>389 CDD:173412 34/196 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..437 23/119 (19%)
SPRY_PRY_TRIM25 464..632 CDD:293971 43/185 (23%)

Return to query results.
Submit another query.