Sequence 1: | NP_001188786.1 | Gene: | Trim9 / 34453 | FlyBaseID: | FBgn0051721 | Length: | 740 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017173902.1 | Gene: | Mid1 / 17318 | MGIID: | 1100537 | Length: | 706 | Species: | Mus musculus |
Alignment Length: | 853 | Identity: | 198/853 - (23%) |
---|---|---|---|
Similarity: | 299/853 - (35%) | Gaps: | 299/853 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MEDELRCPTCKQLYANPVLLPCFHALCLGCALDIQTPYSPGSALPGAVNGAGAASAAGHNGLHGN 65
Fly 66 GGGAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGVVCCS 130
Fly 131 NTSRPVSYAGTGLLPGVGNVVAPPGAAYCLTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDRF--- 192
Fly 193 ----------------------CAREALRCQMCETDP-KVASLICEQCEIRYCDACRELTHPARG 234
Fly 235 PLAKHTLVKPRGAAQQRESVCGEHE-ETLSQYCLSCKAPACGLC--IGELRHQAHDVQSINVTCK 296
Fly 297 AQKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHA---------QCEALIQAI 352
Fly 353 HDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGLIQFCIEALKETDSAAFLQVGSMLINR 417
Fly 418 VTNTDMTWHQEVTNAAPRVSPIVDL--TLDDAAL-----ARAIDNLNFIQMRAVKDGDERCPAAP 475
Fly 476 MTPTILPSDCSAENNSVTVAWQPPNHSFVEGYVLELDDGSG-----GEF---------------- 519
Fly 520 ------REVYC------GKETIC-----------------TVDGLHFNSMYNARVKAFNSAGEGE 555
Fly 556 YSELIGLQTAEVAWFTFDPVLSGGAGSGLIFSKNNATVSVE--------------GWEHRVALGS 606
Fly 607 VGFSRGVHYWEFTIDNYTADTDPAFGVARIDVARNKMLGKDEKSFAMYIDRQRSWFQHN------ 665
Fly 666 --SIHERRVEGGITTGSTIGVLLDLERHTLSFLVNEMPQGSVAFRDLYGVFYPAVSINRGVTL-T 727
Fly 728 MHTAMDAP 735 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Trim9 | NP_001188786.1 | RING-HC_TRIM9_like_C-I | 2..37 | CDD:319490 | 17/34 (50%) |
zf-B_box | 250..291 | CDD:306989 | 16/43 (37%) | ||
ClassIIa_HDAC_Gln-rich-N | 298..420 | CDD:330228 | 39/130 (30%) | ||
FN3 | 472..564 | CDD:238020 | 32/141 (23%) | ||
SPRY_PRY_TRIM67_9 | 561..735 | CDD:293947 | 49/196 (25%) | ||
Mid1 | XP_017173902.1 | RING_Ubox | 8..61 | CDD:388418 | 24/161 (15%) |
RING-HC finger (C3HC4-type) | 10..59 | CDD:319361 | 22/157 (14%) | ||
Bbox1_MID1_C-I | 115..164 | CDD:380894 | 20/48 (42%) | ||
Bbox2_MID1_C-I | 168..214 | CDD:380880 | 16/47 (34%) | ||
BBC | 219..344 | CDD:128778 | 39/141 (28%) | ||
COS | 323..374 | CDD:375994 | 14/58 (24%) | ||
FN3 | <472..520 | CDD:238020 | 14/48 (29%) | ||
SPRY | 524..700 | CDD:383051 | 48/191 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24099 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |