DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trim9 and TRIM3

DIOPT Version :10

Sequence 1:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_047282213.1 Gene:TRIM3 / 10612 HGNCID:10064 Length:827 Species:Homo sapiens


Alignment Length:619 Identity:120/619 - (19%)
Similarity:191/619 - (30%) Gaps:180/619 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 ADSGVVCCSNTSRPVSYAGTGLLPG--------------------VGNVVAPPGAAYCLTCPLCR 166
            :|.|:..|.:  |.:...|.|..||                    .|..|.|....: |.|.:| 
Human    48 SDPGLQTCRD--RWLQVGGAGCTPGRGWCEWREPSVGAMAKREDSPGPEVQPMDKQF-LVCSIC- 108

  Fly   167 KLVFFDDGGVRNLPTYRAMEAIVDRFCAREALRCQMCETDPKVASLICEQCEIRY---------C 222
                                  :||:...:.|.|         ....||:|...|         |
Human   109 ----------------------LDRYQCPKVLPC---------LHTFCERCLQNYIPAQSLTLSC 142

  Fly   223 DACRELT-HPARGPLAKH------TLVK-----PRGAAQQRE----SV-------CGEHE-ETLS 263
            ..||:.: .|.:|..|..      :|::     |.||....:    ||       |..|| :|:.
Human   143 PVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTME 207

  Fly   264 QYCLSCKAPACGLC-IGELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTTEFIQRLKGMS 327
            .||.:|:...||.| .||  |:.|....:....:..|..|...|:.:..:....:..|..:.|:|
Human   208 FYCEACETAMCGECRAGE--HREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGIS 270

  Fly   328 DKVTESCMEFERLVHAQCEALIQAIHDRREYLLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGLI 392
            .::.|...|....:.|..|.|.||:..|::.|:..:......|.::|:.|........:......
Human   271 QQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSC 335

  Fly   393 QFCIEALKETDSAAFLQVGSMLINRVTNTDMTWHQEVTNAAPRVSPIVDLTLDDAALARAIDNLN 457
            .|..:||:...:...|.|...:..|:.........|    .|..:..::|.|:...|.|::.||.
Human   336 SFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPE----RPHENAQLELVLEVDGLRRSVLNLG 396

  Fly   458 FI-----------------------------------QMRAVKDGDERCPAAPMTP--TILPSDC 485
            .:                                   ..|.|:.|.....|....|  |.||...
Human   397 ALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDGTRLPVPV 461

  Fly   486 SAENN-----------------SVTVAWQPPNHSFVEGYVLELDD----------------GSGG 517
            ....|                 ||.:..||...|......|...|                |.|.
Human   462 VDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALRPGDLPPSPDDVKRRVKSPGGPGS 526

  Fly   518 EFREVYCGKETICTVDGLHFNSMYNARVKAFNSAGEGEYSELIGLQTAEVAWFT-FDPVLSGGAG 581
            ..|:....:.          :|||:...|..::..|.|....:|.:..|...|| ...|.:..:|
Human   527 HVRQKAVRRP----------SSMYSTGGKRKDNPIEDELVFRVGSRGREKGEFTNLQGVSAASSG 581

  Fly   582 SGLIFSKNNATVSV---EGWEHRVALGSVGFSRG 612
            ..::...||..:.|   || :.:...|..|.|.|
Human   582 RIVVADSNNQCIQVFSNEG-QFKFRFGVRGRSPG 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238
Bbox1_TRIM9-like_C-I 199..244 CDD:380861 12/65 (18%)
Bbox2_TRIM9-like 255..291 CDD:380822 14/37 (38%)
CC_brat-like 298..420 CDD:475168 24/121 (20%)
FN3 472..564 CDD:238020 23/126 (18%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 15/56 (27%)
TRIM3XP_047282213.1 RING-HC_TRIM3 99..146 CDD:438424 12/79 (15%)
Bbox2_TRIM3_C-VII 190..236 CDD:380883 15/47 (32%)
BBC 241..367 CDD:128778 24/125 (19%)
IG_FLMN 405..502 CDD:214720 14/96 (15%)
NHL_TRIM2_like 554..827 CDD:271330 16/62 (26%)
NHL repeat 572..611 CDD:271330 8/39 (21%)
NHL repeat 619..658 CDD:271330
NHL repeat 661..698 CDD:271330
NHL repeat 705..746 CDD:271330
NHL repeat 752..794 CDD:271330
NHL repeat 797..823 CDD:271330
Blue background indicates that the domain is not in the aligned region.

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