Protein Alignment Trim9 and trim55

DIOPT Version :10

• Sequence 1: NP_001188786.1
• Gene: Trim9 / 34453
• FlyBaseID: FBgn0051721
• Length: 740
• Species: Drosophila melanogaster
• Sequence 2: XP_004915232.2
• Gene: trim55 / 100485287
• XenbaseID: XB-GENE-6087245
• Length: 533
• Species: Xenopus tropicalis
• Alignment Length: 612
• Identity: 120/612 - (19%)
• Similarity: 199/612 - (32%)
• Gaps: 229/612 - (37%)

  Fly     1 MEDELRCPTCKQLYANP-VLLPCFHALCLGCALDI---QTPYSPGSALPGAVNGAGAASAAGHNG 61
            :|.:|.||.|.::::.| |:|||.|.||..||.||   ..||.|
 Frog    20 LEKQLICPICLEMFSKPVVILPCQHNLCRKCASDIFQASNPYLP--------------------- 63

  Fly    62 LHGNGGGAGGGAAAPVTNPNGPGTRHSSHSSAASTASSNTGSESVTSDQDQSDKVSIFSEADSGV 126
                                   ||.
 Frog    64 -----------------------TRG--------------------------------------- 66

  Fly   127 VCCSNTSRPVSYAGTGLLPGVGNVVAPPGAAYCLTCPLCRKLVFFDDGGVRNLPTYRAMEAIVDR 191
                                 ||.||..|.   ..||.||..|..|..||..|.....:|.|:|
 Frog    67 ---------------------GNTVASGGR---FRCPSCRHEVVLDRHGVYGLQRNLLVENIID- 106

  Fly   192 FCAREALRCQMCETDPKVASLICEQCEIRYCDACRELTHPARG---PLAKHTLVKPRGAAQQRES 253
                                 |.:|          |.|.|.|.   |:
 Frog   107 ---------------------IYKQ----------ESTRPERKTDCPM----------------- 123

  Fly   254 VCGEHE-ETLSQYCLSCKAPACGLCIGELRHQAHDVQSINVTCKAQKTELSHNLQQLSEKARSTT 317
             |.||| |.::.|||:|:.|.|.:|.....|:..:|..:....:.||:|||..:..|       .
 Frog   124 -CDEHEDEKINIYCLNCEVPTCSMCKVFGAHKTCEVAPLTQVFQRQKSELSDGIAIL-------V 180

  Fly   318 EFIQRLKGMSDKVTESCMEFERLVHAQCEALIQ-------AIHDRREYLLEAIRMDKDTKIRILK 375
            ....|::.:..::.|||...|.....|.|.|.:       .:.:|:..|.:.|..|::.::..::
 Frog   181 GCNDRIQAVVSQLEESCKTVEENSKRQKEQLCEKFDYLYAILEERKGELTQIITRDQEERLEYVR 245

  Fly   376 DQQSNCTGKLQQTTGLIQFCIEALKETDSAAFLQVGSMLINRVTNTDMTWHQE-VTNAAPRVSP- 438
            .........::..:.|::..|:.::|.:.|.|||....|:.:::.....:..| :.:....::.
 Frog   246 SLMRKYGSHMETVSKLVETGIQFMEEPEIAVFLQNSKPLLQKMSEASSGFQMEKIESGYENMNNF 310

  Fly   439 IVDLTLDDAALARAIDNLNFIQMRAVKDGDERCPAA----------------------------- 474
            :|||..::    |.|..::|  .|..::.:|...||
 Frog   311 LVDLDREE----RIIREIDF--YREDEEEEEEEEAAEGEDFEGAHTESSGEEDIAERGAQTSQLE 369

  Fly   475 ---PM-TPTILPSDCSAENNSVTVAWQPPNHSFVEGYVLELDDGSGGEFR-EVYCGKETICTVDG 534
               |: ||.:||.....|.::.:|  ..|.   ::|.|...|.....|.. :|....|   ..|.
 Frog   370 TKEPVSTPEVLPPPPELELSTPSV--PAPQ---IKGEVEPSDIQQASESNAQVLSAAE---PTDP 426

  Fly   535 LHFNSMYNARVKAFNSAGEGEYSELIG 561
            |.:.|.|..:.:..:||.:.|.|:.:|
 Frog   427 LLYPSWYKGQAQQDSSADKVELSDALG 453

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trim9	NP_001188786.1	RING-HC_TRIM9-like_C-I	2..>35	CDD:438238	17/36 (47%)
		Bbox1_TRIM9-like_C-I	199..244	CDD:380861	7/47 (15%)
		Bbox2_TRIM9-like	255..291	CDD:380822	14/36 (39%)
		CC_brat-like	298..420	CDD:475168	26/128 (20%)
		FN3	472..564	CDD:238020	25/124 (20%)
		SPRY_PRY_TRIM67_9	561..735	CDD:293947	1/1 (100%)
trim55	XP_004915232.2	RING-HC_MuRF2	21..84	CDD:438417	31/169 (18%)
		Bbox_SF	122..166	CDD:469587	15/61 (25%)
		CC_brat-like	168..291	CDD:475168	26/129 (20%)