DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18302 and Lipn

DIOPT Version :10

Sequence 1:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_081616.1 Gene:Lipn / 70166 MGIID:1917416 Length:400 Species:Mus musculus


Alignment Length:344 Identity:57/344 - (16%)
Similarity:113/344 - (32%) Gaps:107/344 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QILELLQDQLTTDKAGEAQGKLLRDTQEKRRELEISMSDTENQL------------SVVLLELEK 105
            |:|:|....::..:.|:|...|        |||.:|    :|:|            |:.:|:|. 
Mouse    72 QVLDLSNCNISKIEDGDAVSSL--------RELYLS----QNRLTSLPNGFLTKAYSLEVLDLG- 123

  Fly   106 WRSLVENSKDVLRKAKLEHDELDADANKYNEEIKLEKERIAAKLRKMDALNRELEQLISKAGG-- 168
                |.|.||:.::......:|......:|:...|.:..:...|:.::.:...|....|...|  
Mouse   124 ----VNNLKDLPKRFLQSSHKLRELILGWNQLSALPQSSLKPSLQHLELVGNPLACTCSLWEGLR 184

  Fly   169 QEMNPDELKLLDVQQDIVEIEAQLKEANASWVKLQSNVVALS----------------------- 210
            ..::.:.....|:..::......:......|....|:|..|:                       
Mouse   185 SHLHDNSSSFQDLVGNLTCASPHILAGRTLWSLTTSDVCHLANLTALFILLPLFLLFSLVLCWCC 249

  Fly   211 --EKRSLQLNEINYSRKK-------------LLLAEQKAIKIEALLAEVMNENREIVRSLSALNT 260
              :|:..:.:..:.:||:             .|.....|:.:        |..:|::.....:  
Mouse   250 GRKKKKKETSSFSPTRKRHNSSHCNGRWPHAKLPTGDSAVSV--------NSGKEVILRNQLM-- 304

  Fly   261 RLDAASLELFKTRKVHEK------------------------GEQECE-VAHHQATERLRDAEMA 300
             |..:|..|..||.::|:                        |:|:.: |:..:..:...|.|..
Mouse   305 -LQPSSNLLGSTRDIYEEVEIKLGSVDSLAPPPSTCSTEGTPGKQDLDTVSVSEVMKDSADREKV 368

  Fly   301 VLNLEQELKDL--GKEIED 317
            .|....|...|  |.||||
Mouse   369 YLTQSTEYYSLVPGIEIED 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 57/344 (17%)
LipnNP_081616.1 PLN02872 39..397 CDD:215470 57/344 (17%)

Return to query results.
Submit another query.