DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18302 and Lipf

DIOPT Version :10

Sequence 1:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_059037.1 Gene:Lipf / 50682 RGDID:708441 Length:395 Species:Rattus norvegicus


Alignment Length:373 Identity:132/373 - (35%)
Similarity:199/373 - (53%) Gaps:21/373 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DANLITPDLIKKYGYPAETHKIQAKDGFVLTAHRIP-------KPGGQPVL-LVHGLLDSSVAYV 94
            :||:....:|..:|||.:.:::..:||::|..:|||       ..|.:||: |.|||:.|:..::
  Rat    29 EANMNISQMITYWGYPCQEYEVVTEDGYILGVYRIPHGKNNSENIGKRPVVYLQHGLIASATNWI 93

  Fly    95 ILGPERSLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDLPAAIDYVLA 159
            ...|..||.|:|:|.||||||.|:|||.:|||:..|.....:||.|||.|:..|||||.|::::.
  Rat    94 ANLPNNSLAFMLADAGYDVWLGNSRGNTWSRKNVYYSPDSVEFWAFSFDEMAKYDLPATINFIVQ 158

  Fly   160 RSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIKLMQALAPVVFWDYIDSPI-ILTFVKYLRPL 223
            ::.. |:|||||||||||..|:..|......||||...|||||....|..||: .::|:    |.
  Rat   159 KTGQ-EKIHYVGHSQGTTIGFIAFSTNPTLAKKIKTFYALAPVATVKYTQSPLKKISFI----PT 218

  Fly   224 VFIARSFGIYEFPPENEVWRSLIHKICS-FVFQNTCTYFLMEAMGVDYAQFNSSLLPLFTGHASS 287
            ......||...|.|.......|..::|| .|....|:..|....|.|....|.|...::.||..:
  Rat   219 FLFKLMFGKKMFLPHTYFDDFLGTEVCSREVLDLLCSNTLFIFCGFDKKNLNVSRFDVYLGHNPA 283

  Fly   288 GSSVKSLEHYGQQIHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRLTSDK 352
            |:||:...|:.|.:.||.|..:|:.|..:|..::...|||:|.::.:...||::...||.|...:
  Rat   284 GTSVQDFLHWAQLVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVSAMTVPVAVWNGGNDILADPQ 348

  Fly   353 DVVRLRDILPNVVLDYMFPDPL--YNHINFIWGNDVKTVLNDRMIELM 398
            ||..|...|.|:    :|...:  |||::|||..|....:.:.||.:|
  Rat   349 DVAMLLPKLSNL----LFHKEILAYNHLDFIWAMDAPQEVYNEMISMM 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 132/373 (35%)
LipfNP_059037.1 PLN02872 4..389 CDD:215470 129/368 (35%)

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