DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18302 and CG11406

DIOPT Version :10

Sequence 1:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001014548.1 Gene:CG11406 / 37877 FlyBaseID:FBgn0034990 Length:396 Species:Drosophila melanogaster


Alignment Length:365 Identity:129/365 - (35%)
Similarity:191/365 - (52%) Gaps:11/365 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IKKYGYPAETHKIQAKDGFVLTAHRIPKPGG-------QPVLLVHGLLDSSVAYVILGPERSLGF 104
            :::.....:.|:|:..||:.|:.||||.|..       :|.||:||||.|:..:|..|..|||..
  Fly    28 VQRQQLQCQVHRIETADGYRLSLHRIPAPQNRWCPQQLRPFLLMHGLLGSAGDFVSGGRGRSLAL 92

  Fly   105 LLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDLPAAIDYVLARSKDFEQIHY 169
            .|....:||||.|.||..:||.|:.......:||.||:||:|:|||||.:||||||: :..|:||
  Fly    93 ELHARCFDVWLANARGTTHSRGHRTLQTSDARFWRFSWHEIGIYDLPAIVDYVLART-NRRQLHY 156

  Fly   170 VGHSQGTTSFFVMGSERSAYMKKIKLMQALAPVVFWDYIDSPIILTFVKYLRPLVFIARSFGIYE 234
            ||||||||...|:.|:|..|..:......||||.|..::.||.:............:....|::|
  Fly   157 VGHSQGTTVLLVLLSQRPEYNARFANAALLAPVAFLQHLSSPPLRLLASDSSMATLLLNKLGLHE 221

  Fly   235 FPPENEVWRSLIHKIC--SFVFQNTCTYFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEHY 297
            ..|.:.:.:......|  |......||.|....:|......:.|:||.......:|.|...|:|:
  Fly   222 LLPASALTQVGGQFFCTASRPTYALCTLFTSVYVGFSDYPLDRSILPRILETTPAGISRGQLQHF 286

  Fly   298 GQQIHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRLTSDKDVVRLRDILP 362
            ||.|:||.|.:|:|.|...|...:|..|||.|:|.||..::.:::...|.|:|..||.||...|.
  Fly   287 GQLINSGKFQQYDYRSPRLNTLRYGRTTPPSYQLANVRLQLQIFHGSRDTLSSLADVQRLVRELR 351

  Fly   363 NVVLDYMFPDPLYNHINFIWGNDVKTVLNDRMIELMRKVD 402
            |.|.. |:..|.||||:|::.:....|:..|:|:...::|
  Fly   352 NSVTQ-MYQVPGYNHIDFLFASSAPQVVFQRIIQQAWQLD 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 128/360 (36%)
CG11406NP_001014548.1 PLN02872 22..384 CDD:215470 127/357 (36%)

Return to query results.
Submit another query.