DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18302 and Lipk

DIOPT Version :10

Sequence 1:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001099844.1 Gene:Lipk / 294094 RGDID:1309724 Length:397 Species:Rattus norvegicus


Alignment Length:378 Identity:126/378 - (33%)
Similarity:199/378 - (52%) Gaps:27/378 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DANLITPDLIKKYGYPAETHKIQAKDGFVLTAHRIPKPGG--------QPVLLVHGLLDSSVAYV 94
            :||:...::|..:|||.|.|.:..:||::|..:|||...|        ..|.|.|||:.|:..::
  Rat    28 EANMNISEIISYWGYPYERHDVVTEDGYILGTYRIPHGKGCSRKAVPKAVVYLQHGLIASASNWI 92

  Fly    95 ILGPERSLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDLPAAIDYVLA 159
            ...|..||.|||:|.||||||.|:|||.:||||.|.....|::|.||..|:..|||||.|:.:|.
  Rat    93 CNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHLRLSPKSPEYWAFSLDEMAKYDLPATINLILE 157

  Fly   160 RSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIKLMQALAPVVFWDYIDSPIILTFVKYLRPLV 224
            :|.. :|:.|||||||||..|:..|......|||::..||||||...|..||        ::.|.
  Rat   158 KSGQ-KQLFYVGHSQGTTIAFIAFSTNPELAKKIRMFFALAPVVTVKYTQSP--------MKKLT 213

  Fly   225 FIARS-----FGIYEFPPENEVWRSLIHKICS-FVFQNTCTYFLMEAMGVDYAQFNSSLLPLFTG 283
            .::|.     ||...|.....:.:.:..|:|: .:|:..|:.||....|.|....|.|.|.::..
  Rat   214 TLSRKAVKILFGDKMFSTHTWLEQFIATKVCNRKLFRQLCSNFLFSLSGFDPQNLNMSRLDVYMA 278

  Fly   284 HASSGSSVKSLEHYGQQIHSGGFFKYNYYSTWENRRNHGVDTPPQYKLTNVDCKVALYYSRNDRL 348
            .:.:|:||:::.|:.|.::||....:::.:..:|..:....|||.|.::.:....|::....|.:
  Rat   279 QSPAGTSVQNMLHWAQAVNSGQLQAFDWGNPDQNMMHFNQLTPPVYNISKMRVPTAMWSGGRDVV 343

  Fly   349 TSDKDVVRLRDILPNVV-LDYMFPDPLYNHINFIWGNDVKTVLNDRMIELMRK 400
            ..:||.   :::||.|. |.|....|.|||::|..|.|....:...:|.:|.:
  Rat   344 ADEKDT---KNLLPKVANLIYYKEIPHYNHMDFYLGQDAPQEVYRDLITMMEE 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 125/375 (33%)
LipkNP_001099844.1 PLN02872 34..388 CDD:215470 122/365 (33%)

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