DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18302 and Lipa

DIOPT Version :10

Sequence 1:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_036864.3 Gene:Lipa / 25055 RGDID:3008 Length:397 Species:Rattus norvegicus


Alignment Length:403 Identity:134/403 - (33%)
Similarity:216/403 - (53%) Gaps:28/403 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CY--GILISLFIFCDTASGDLIKVDKTILEDANLITPDLIKKYGYPAETHKIQAKDGFVLTAHRI 72
            |:  |||:|     ...:|.:..||    .:||:...::|..:|||.|.|.:|..||::|..|||
  Rat     9 CFVVGILLS-----GGPTGTISAVD----PEANMNVTEIIMHWGYPGEEHSVQTGDGYILGVHRI 64

  Fly    73 P-------KPGGQPVL-LVHGLLDSSVAYVILGPERSLGFLLSDMGYDVWLLNTRGNRYSRKHKR 129
            |       ..|.:||: |.||.|..|..:|......||||:|:|.|:|||:.|:|||.:|||||.
  Rat    65 PHGRKNQFDKGPKPVVYLQHGFLADSSNWVTNIDNNSLGFILADAGFDVWMGNSRGNTWSRKHKT 129

  Fly   130 YHRYQPQFWDFSFHELGVYDLPAAIDYVLARSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIK 194
            ....|.::|.|||.|:..|||||:|:|:|.::.. ||::|||||||.|..|:..|:.....||:|
  Rat   130 LSVSQDEYWAFSFDEMAKYDLPASINYILNKTGQ-EQLYYVGHSQGCTIGFIAFSQMPELAKKVK 193

  Fly   195 LMQALAPVVFWDYIDSPIILTFVKYLR-PLVFIARSFGIYEFPPENEVWRSLIHKICSFV-FQNT 257
            :..|||||:..::...|:    ||..| |.:.:...||..:|.|::.:.:.|...||:.| .:..
  Rat   194 MFFALAPVLSLNFASGPM----VKLGRLPDLLLEDLFGQKQFLPQSAMVKWLSTHICTHVIMKEL 254

  Fly   258 CTYFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEHYGQQIHSGGFFKYNYYSTWENRRNHG 322
            |........|.:....|.|.:.::|.|..:|:||:::.|:.|.:.......:::.|:.:|..::.
  Rat   255 CANIFFLICGFNEKNLNMSRVDVYTTHCPAGTSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYN 319

  Fly   323 VDTPPQYKLTNVDCKVALYYSRNDRLTSDKDVVRLRDILPNVVLDYMFPDPLYNHINFIWGNDVK 387
            ...||.|.:.::....||:....|.|....|:..|...:|.:|.....|:  ::|::||||.|..
  Rat   320 QSYPPLYSIKDMQLPTALWSGGKDWLADTSDINILLTEIPTLVYHKNIPE--WDHLDFIWGLDAP 382

  Fly   388 TVLNDRMIELMRK 400
            ..|.:.::.||:|
  Rat   383 WRLYNEVVSLMKK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 130/395 (33%)
LipaNP_036864.3 PLN02872 7..394 CDD:215470 132/400 (33%)

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