DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18302 and lipl-2

DIOPT Version :10

Sequence 1:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_505527.1 Gene:lipl-2 / 185840 WormBaseID:WBGene00009773 Length:411 Species:Caenorhabditis elegans


Alignment Length:390 Identity:120/390 - (30%)
Similarity:198/390 - (50%) Gaps:49/390 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DANLITPDLIKKYGYPAETHKIQAKDGFVLTAHRIPK-------PGG-QPVLLV-HGLLDSSVAY 93
            :.|:.|..:|:::||.||.|.:..:||::|...|||.       |.| :||:|: ||||..:..:
 Worm    30 ELNMNTSQIIERWGYKAEVHTVTTEDGYILQMQRIPYGKTSVTWPNGKRPVILLQHGLLACASDW 94

  Fly    94 VILGPERSLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHRYQPQFWDFSFHELGVYDLPAAIDYVL 158
            |...|.:|..|:.:|.|:||||.|.||..|.||:.:....:..||.||:.|:..||:||.:|:||
 Worm    95 VDNLPTQSAAFVFADAGFDVWLGNVRGTTYGRKNTKLDPSETAFWQFSWDEMAQYDVPAMVDHVL 159

  Fly   159 ARSKDFEQIHYVGHSQGTTSFF--VMGSERSAYMKKIKLMQALAPVVFWDYIDSPIILTFVKYLR 221
            |.:.. |.::|:||||||...|  :......::.||||...||||:            ..||.::
 Worm   160 AMTGQ-ENLYYMGHSQGTLIMFTHLAKDTDGSFAKKIKRYFALAPI------------GAVKNIK 211

  Fly   222 P-LVFIARSF-----GIYE------FPPENEVWRSLIHKIC--SFVFQNTCTYFLMEAMGVDYAQ 272
            . |.:.|..|     |.||      |.|:|.:.:.....||  |......|...|....|.:..|
 Worm   212 GFLSYFAHKFSPEFDGWYELFGSKDFLPDNWITKMAAKDICGASEKEAELCDNELFLIGGPESDQ 276

  Fly   273 FNSSLLPLFTGHASSGSSVKSLEHYGQQIHSGGFFKYNYYSTWE---NRRNHGVDTPPQYKLTNV 334
            :|:|...:::....:|:|.:::.|:.|.:.:|....::    |.   |::.:|.||||:|....:
 Worm   277 WNASRTAIYSSQDPAGTSTQNIVHWMQMVRNGRVPAFD----WGKKINKKKYGQDTPPEYDFGAI 337

  Fly   335 -DCKVALYYSRNDRLTSDKDV--VRLRDILPNVVLDYMFPDPLYNHINFIWGNDVKTVLNDRMIE 396
             ..|:.||:|.:|.|....|:  ..|:::.|.|:.:.:.... |||::|.||.:....:.|:.|:
 Worm   338 KGTKIHLYWSDDDWLGDPTDIHDFLLKELNPAVIAENVNLKE-YNHLDFTWGLNATFQIYDKAIK 401

  Fly   397  396
             Worm   402  401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 120/390 (31%)
lipl-2NP_505527.1 PLN02872 4..401 CDD:215470 119/388 (31%)

Return to query results.
Submit another query.