DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18302 and Lipj

DIOPT Version :10

Sequence 1:NP_609420.1 Gene:CG18302 / 34452 FlyBaseID:FBgn0032266 Length:406 Species:Drosophila melanogaster
Sequence 2:XP_006231366.1 Gene:Lipj / 100360690 RGDID:2321667 Length:399 Species:Rattus norvegicus


Alignment Length:406 Identity:129/406 - (31%)
Similarity:204/406 - (50%) Gaps:32/406 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ILISLFIFCDTASGDLIKVDKTILEDANLITPDLIKKYGYPAETHKIQAKDGFVLTAHRIPKPGG 77
            ::.|:|.|.:.         |....:||:....:|..:||.:|.|::..:||::|...|||....
  Rat    13 VIGSIFCFLNA---------KPKNPEANMNVSQIISYWGYESEEHEVMTEDGYILLIFRIPHGKN 68

  Fly    78 Q---------PVL-LVHGLLDSSVAYVILGPERSLGFLLSDMGYDVWLLNTRGNRYSRKHKRYHR 132
            :         ||: |.|||..|:..:::..|...|.|||:|.|::|||.|:||...:|||.|...
  Rat    69 ENKSSHNTRRPVVYLHHGLTVSADYWILDPPSNCLAFLLADAGFEVWLGNSRGTNNARKHVRLDP 133

  Fly   133 YQPQFWDFSFHELGVYDLPAAIDYVLARSKDFEQIHYVGHSQGTTSFFVMGSERSAYMKKIKLMQ 197
            ...:||||||:|...|||||.|.::|..::. .||:|:|||||....:...:......:|||:..
  Rat   134 DSKEFWDFSFNEQIEYDLPAIIYFILNETRQ-TQIYYIGHSQGVYLAYAAFATNPQLAQKIKINF 197

  Fly   198 ALAPVVFWDYIDSPIILTFVKYLRPLVFIARSFG---IYEFPPENEVWRSLIHKICSFVFQNTCT 259
            ||.|||...|:..  :...:.|:.|.| |...||   |:.....|::.|.|.|:   ......||
  Rat   198 ALGPVVITKYLTG--VFRTIAYIHPTV-IKTMFGEKDIFSKSNANDILRFLCHR---EQIATACT 256

  Fly   260 YFLMEAMGVDYAQFNSSLLPLFTGHASSGSSVKSLEHYGQQIHSGGFFKYNYYSTWENRRNHGVD 324
            ..|:...|.:....|.|.:.:::.|..:|:||:|:.|:.|.|.||.|..|::.|...|..::...
  Rat   257 SLLIVLFGYNPGNLNESRIDVYSEHIPAGTSVRSILHFSQGIRSGLFQAYDWGSESLNVLHYNQS 321

  Fly   325 TPPQYKLTNVDCKVALYYSRNDRLTSDKDVVRLRDILPNVVLDYMFPDPLYNHINFIWGNDVKTV 389
            |||.|.:.::..:.|::....|.|...|||..|....||::  |....|.|||::||.|.|....
  Rat   322 TPPIYNIEDMKVRTAMWSGERDLLGDPKDVKNLAAKTPNLI--YHKKIPHYNHMDFILGKDAVVQ 384

  Fly   390 LNDRMIELMRKVDNGE 405
            :..::||.:.: |..|
  Rat   385 VYRKIIEFINR-DQSE 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18302NP_609420.1 PLN02872 13..399 CDD:215470 127/398 (32%)
LipjXP_006231366.1 PLN02872 35..392 CDD:215470 120/365 (33%)

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