DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18301 and Lipo4

DIOPT Version :10

Sequence 1:NP_609419.1 Gene:CG18301 / 34451 FlyBaseID:FBgn0032265 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001310315.1 Gene:Lipo4 / 628236 MGIID:3779637 Length:398 Species:Mus musculus


Alignment Length:390 Identity:131/390 - (33%)
Similarity:216/390 - (55%) Gaps:35/390 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DAHLNTIQLISKYGYPAENYTVQSDDGYLLGLFRIAR-----PGALPVLLV---HGLMDSSDTWV 97
            :||:|..|:|..:.||:|.|.|.:||||:|.:.||..     ..:.|.::|   |||:.:...||
Mouse    28 EAHMNVSQIIKHWEYPSEEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLLATPGAWV 92

  Fly    98 MMGPSSSLGYMLYEQGYDVWMANVRGNTYTKRHVRYSAEDSDFWNFSFHEMGIFDLPAIIDYILM 162
            ...|.:||.::|.:.||||||.:.||:|:.|:||..:.:..:||:|||.:|..:||||.|::||.
Mouse    93 SNLPDNSLAFILADAGYDVWMGSSRGSTWAKKHVTLNTDSKEFWDFSFDQMIKYDLPATINFILD 157

  Fly   163 QSGFGQLHYIGHSQGSTIFWILASERPEYMEKIVMMQALAPVAFLSHCRSPIVNLLASQDTAVAS 227
            ::|..|::|||||||:.|.....:...:..|||.:...|||:..:.|.:. |..|        .|
Mouse   158 KTGQKQIYYIGHSQGTLIAIGAFATNQKLAEKIKLNILLAPIYSVQHSKG-IARL--------TS 213

  Fly   228 FLSAA------GYNEFLPSNSVIDQFKRYACRDIISSSVCQSLFFILFGFNGQQVNQTMLPIVVG 286
            :|:..      |..||||: .|..:...|.|...:.::.|.::...:.|::.:|:|.:.|.:.|.
Mouse   214 YLTPTTIKVLFGEKEFLPT-VVSSEVGAYVCDINLVTAGCAAMIGSMGGYSPEQLNMSRLDVYVK 277

  Fly   287 HTPAGASIRQMHHYGQLRNSGKFQQFDYG--LLNFLHYGSLSPPPYELEKVKAKVAIYYAKNDWI 349
            ...||.|::.:.||.|:|.||..|.:|:|  .||..||...:||.|.:|.:|...|::....|::
Mouse   278 LNLAGTSVKILIHYNQIRRSGILQAYDWGSSSLNMQHYNQTTPPVYNVEDMKVPTAMFTGLKDFL 342

  Fly   350 APPEDVDMLFNRLPNVVEKYLVPNENFNHFDLVWGRDAKRILWNRMLGVMQSVVPYSSYNDGDSI 414
            :.||||::|..::.|:.  ||....:|:|||.:||.:|:..:...:|.:::..       |||.|
Mouse   343 SDPEDVEILKPKIHNLT--YLKTIPDFSHFDFIWGLNAREEVSEEILTILRKY-------DGDYI 398

  Fly   415  414
            Mouse   399  398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18301NP_609419.1 PLN02872 48..407 CDD:215470 124/374 (33%)
Lipo4NP_001310315.1 PLN02872 34..391 CDD:215470 124/368 (34%)

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