DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18301 and lipa

DIOPT Version :10

Sequence 1:NP_609419.1 Gene:CG18301 / 34451 FlyBaseID:FBgn0032265 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001015847.2 Gene:lipa / 548564 XenbaseID:XB-GENE-952977 Length:409 Species:Xenopus tropicalis


Alignment Length:368 Identity:131/368 - (35%)
Similarity:211/368 - (57%) Gaps:13/368 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DAHLNTIQLISKYGYPAENYTVQSDDGYLLGLFRI------ARPGALPVL-LVHGLMDSSDTWVM 98
            :|.:|..:||...|||:|.|.|.::|||:|.:.||      |..|..||: |.|||:.....||.
 Frog    44 EATMNISELIRYRGYPSEEYEVLTEDGYILSVNRIPHGVKYASEGPKPVVFLQHGLLADGSNWVT 108

  Fly    99 MGPSSSLGYMLYEQGYDVWMANVRGNTYTKRHVRYSAEDSDFWNFSFHEMGIFDLPAIIDYILMQ 163
            ...::|||::|.:.|||||:.|.||||::::|...|.:..:||.||:.|:...||||::|:|..:
 Frog   109 NLENNSLGFILADAGYDVWIGNSRGNTWSRKHKSLSPDQEEFWAFSYDELAKKDLPAVVDFITKK 173

  Fly   164 SGFGQLHYIGHSQGSTIFWILASERPEYMEKIVMMQALAPVAFLSHCRSPIVNLLASQDTAVASF 228
            :|..|:.|:|||||:||.:|..|..|:..:||.|...|||||.:...:||:..|....:..:...
 Frog   174 TGQEQIFYVGHSQGTTIAFIAFSSLPQLAKKIKMYFGLAPVATVKFSKSPLAKLGVLPEFLIEEL 238

  Fly   229 LSAAGYNEFLPSNSVIDQFKRYACRDIISSSVCQSLFFILFGFNGQQVNQTMLPIVVGHTPAGAS 293
            .   |..||||...:|.....:.|...|:..:|.::||:|.|||.:.:|.:.:.:...|.|||.|
 Frog   239 F---GKGEFLPQTYLITWLATHFCTHAIADELCGNIFFLLSGFNEKNLNMSRVNVYSSHCPAGTS 300

  Fly   294 IRQMHHYGQLRNSGKFQQFDYGLL-NFLHYGSLSPPPYELEKVKAKVAIYYAKNDWIAPPEDVDM 357
            ::.|.|:.|...||:.:.||:|.. |.:||...:||.|.:..:....|::...|||:|..:||.:
 Frog   301 VQNMLHWRQGVRSGELKAFDFGTKGNMIHYNQTTPPFYHVRDMTVPTALWTGGNDWLADRKDVAL 365

  Fly   358 LFNRLPNVVEKYLVPNENFNHFDLVWGRDAKRILWNRMLGVMQ 400
            |..::.|:|....:|  ::.|.|.:||.||...::|.::.:|:
 Frog   366 LLTQVSNLVYHKEIP--DWEHLDFIWGLDAPERMYNEIIAMMK 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18301NP_609419.1 PLN02872 48..407 CDD:215470 129/361 (36%)
lipaNP_001015847.2 PLN02872 50..409 CDD:215470 129/362 (36%)

Return to query results.
Submit another query.