DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18301 and Lipo1

DIOPT Version :10

Sequence 1:NP_609419.1 Gene:CG18301 / 34451 FlyBaseID:FBgn0032265 Length:422 Species:Drosophila melanogaster
Sequence 2:XP_006231364.1 Gene:Lipo1 / 294097 RGDID:1565682 Length:397 Species:Rattus norvegicus


Alignment Length:389 Identity:129/389 - (33%)
Similarity:207/389 - (53%) Gaps:29/389 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LEANAFFNPFQLAIPSSVLEDAHLNTIQLISKYGYPAENYTVQSDDGYLLGLFRIAR-----PGA 80
            ||.|.  ||           ::|:|..::|..:.||:..|.|.:||||:|.:.||..     ..:
  Rat    21 LEPNK--NP-----------ESHMNVSEIIKYWNYPSLEYEVVTDDGYILPINRIPHGKNNANSS 72

  Fly    81 LPVLLV---HGLMDSSDTWVMMGPSSSLGYMLYEQGYDVWMANVRGNTYTKRHVRYSAEDSDFWN 142
            .|.::|   |||..:...||...|.:||.::|.|.|||||:.|.||:|:.|:||..|.:..:||.
  Rat    73 APKMVVFCQHGLFSTPGVWVANPPDNSLAFILAEAGYDVWLGNSRGSTWAKKHVTLSPDSEEFWA 137

  Fly   143 FSFHEMGIFDLPAIIDYILMQSGFGQLHYIGHSQGSTIFWILASERPEYMEKIVMMQALAPVAFL 207
            |||.:|..:||||.|::||..:|..|::|||||.|:.|.....|...|..|||.:...:|||..:
  Rat   138 FSFDQMIAYDLPATINFILNTTGQEQIYYIGHSLGTLIALGAFSTNQELAEKIKLNILIAPVRTV 202

  Fly   208 SHCRSPIVNLLASQDTAVASFLSAAGYNEFLPSNSVIDQFKRYACRDIISSSVCQSLFFILFGFN 272
            .:.:. ...|||.  .:..:|....|..||||: .|..::.:|.|...:..:.|..:...|.||:
  Rat   203 KYVKG-FGRLLAY--FSPEAFKLVFGKKEFLPT-VVFSEYSKYVCNIKLVDAGCAGVLGSLTGFS 263

  Fly   273 GQQVNQTMLPIVVGHTPAGASIRQMHHYGQLRNSGKFQQFDYG--LLNFLHYGSLSPPPYELEKV 335
            ..|:|.:.:.:.:.|:.||.|.:.:.|.||...||:||.:|:|  .||..||...:||.|.:|.:
  Rat   264 EDQLNTSRIDVYITHSLAGTSTQILIHAGQAIRSGEFQAYDWGSPSLNMQHYNQTTPPLYSVENM 328

  Fly   336 KAKVAIYYAKNDWIAPPEDVDMLFNRLPNVVEKYLVPNENFNHFDLVWGRDAKRILWNRMLGVM 399
            |....::....|::|.|:||..|..::.|::....:|  .|:|.|.:.|.:||..:.:.:|.::
  Rat   329 KVPTVMFTGLKDFLADPKDVANLVPKIFNLIYHKTIP--EFSHLDFIVGLNAKTEVSDEILTIL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18301NP_609419.1 PLN02872 48..407 CDD:215470 122/362 (34%)
Lipo1XP_006231364.1 PLN02872 34..387 CDD:215470 121/358 (34%)

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