DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18301 and lipl-1

DIOPT Version :10

Sequence 1:NP_609419.1 Gene:CG18301 / 34451 FlyBaseID:FBgn0032265 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_506229.1 Gene:lipl-1 / 179771 WormBaseID:WBGene00010062 Length:405 Species:Caenorhabditis elegans


Alignment Length:379 Identity:131/379 - (34%)
Similarity:202/379 - (53%) Gaps:25/379 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LNTIQLISKYGYPAENYTVQSDDGYLLGLFRIARP----------GALPVLLV-HGLMDSSDTWV 97
            :.|.|:|.::||||..|.|.::|||:|.|.||  |          |..||:.: |||..||..||
 Worm    29 MTTPQIIMRWGYPAMIYDVTTEDGYILELHRI--PYGKTNVTWPNGKKPVVFMQHGLECSSSNWV 91

  Fly    98 MMGPSSSLGYMLYEQGYDVWMANVRGNTYTKRHVRYSAEDSDFWNFSFHEMGIFDLPAIIDYILM 162
            :..|:.|..::..:.|||||:.|.|||||:.:|.......|.||::|:.||..:||||:|:..|.
 Worm    92 VNLPTESAAFLFADAGYDVWLGNFRGNTYSMKHKNLKPSHSAFWDWSWDEMQQYDLPAMIEKALE 156

  Fly   163 QSGFGQLHYIGHSQGS-TIFWILASERPEYMEKIVMMQALAPVAFLSHCRSPIVNLLASQDTAVA 226
            .:|...|:|||||||: |:|..|:.::..:..||....|||||..:.|.:..:............
 Worm   157 VTGQDSLYYIGHSQGTLTMFSRLSEDKVGWGNKIKKFFALAPVGSVKHIKGALKFFADYFSLEFD 221

  Fly   227 SFLSAAGYNEFLPSNSVIDQFKRYACRDI-ISSSVCQSLFFILFGFNGQQVNQTMLPIVVGHTPA 290
            .:....|..||||:|.::.......|..: :.:.||..:.|::.|....|:|.|.:||.|.||||
 Worm   222 GWFDVFGSGEFLPNNWIMKLVSESVCAGLKVEAGVCDDVMFLIAGPESNQLNATRVPIYVAHTPA 286

  Fly   291 GASIRQMHHYGQLRNSGKFQQFDYGLL-NFLHYGSLSPPPYELEKVKAKVAIYYAKNDWIAPPED 354
            |.|.:.:.|:.|:...|...::|||.. |..|||..:.|.|:...|...|.:|:..:||:|.|.|
 Worm   287 GTSTQNIVHWIQMVRHGGTPKYDYGEKGNKKHYGQANVPAYDFTTVNRPVYLYWGDSDWLADPTD 351

  Fly   355 V-DMLFNRL-PNVVEKYLVPNE---NFNHFDLVWGRDAKRILWNRMLGVMQSVV 403
            | |.|...| |:.|    |.|.   ::||.|.:||..|.:.::..::.::::.|
 Worm   352 VTDFLLTHLNPSTV----VQNNKLIDYNHLDFIWGLRAPKDIYEPIIDIVRNDV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18301NP_609419.1 PLN02872 48..407 CDD:215470 130/375 (35%)
lipl-1NP_506229.1 PLN02872 33..398 CDD:215470 129/370 (35%)

Return to query results.
Submit another query.