DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip4 and Lipf

DIOPT Version :9

Sequence 1:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_080610.1 Gene:Lipf / 67717 MGIID:1914967 Length:395 Species:Mus musculus


Alignment Length:372 Identity:143/372 - (38%)
Similarity:218/372 - (58%) Gaps:19/372 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DSHLNTYSLIKKYGYPAENHTLETDDGYILTLHRI-------ARPGATPV-LLVHGLLDSSATWV 136
            ::::|...:|..:|||:|.:.:.|:|||||.::||       ...|..|| .|.|||:.|:..|:
Mouse    29 EANMNVSQMITYWGYPSEEYEVVTEDGYILGVYRIPYGKKNSENIGKRPVAYLQHGLIASATNWI 93

  Fly   137 MMGPNKGLGYLLYDQGYDVWMANVRGNTYSRKHVKYSTHHAKFWDFTFHEMGKHDIPATMDYILN 201
            ...||..|.::|.|.|||||:.|.||||:|||:|.||....:||.|:|.||.|:|:|||:|:|:.
Mouse    94 TNLPNNSLAFILADAGYDVWLGNSRGNTWSRKNVYYSPDSVEFWAFSFDEMAKYDLPATIDFIVQ 158

  Fly   202 STGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPV--VNFLAEWHLSV 264
            .||..::||:||||||.:.:|..|..|....||.....|||||.:|:..||.  ::.:.::.|.|
Mouse   159 KTGQEKIHYVGHSQGTTIGFIAFSTNPALAKKIKRFYALAPVATVKYTESPFKKISLIPKFLLKV 223

  Fly   265 SLVLKLIGVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSP 329
                 :.|...|:|.|.........:|....:.. :|||.:|:..||||..||.:...|.:||:|
Mouse   224 -----IFGNKMFMPHNYLDQFLGTEVCSRELLDL-LCSNALFIFCGFDKKNLNVSRFDVYLGHNP 282

  Fly   330 AGASTKQMQHFGQLNRSGGFRQYDHGW-LRNHWIYGTIDPPSYHLENVRAKVALYYGQNDWLAPP 393
            ||.||:.:.|:.||.:||..:.|:.|. |:|...|....||.|.:..:...:|::.|.:|.||.|
Mouse   283 AGTSTQDLFHWAQLAKSGKLQAYNWGSPLQNMLHYNQKTPPYYDVSAMTVPIAVWNGGHDILADP 347

  Fly   394 EDVEMLNRKLPNVVEKYLVDDKEFNHLDFIWGIDARELLWDRMLEIM 440
            :||.||..||||::  |..:...:|||||||.:||.:.:::.::.:|
Mouse   348 QDVAMLLPKLPNLL--YHKEILPYNHLDFIWAMDAPQEVYNEIVTMM 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 142/364 (39%)
Abhydro_lipase 88..139 CDD:282003 22/58 (38%)
Abhydrolase_5 121..>253 CDD:289465 64/132 (48%)
Abhydrolase_5 <368..419 CDD:289465 18/50 (36%)
LipfNP_080610.1 PLN02872 35..389 CDD:215470 141/361 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831806
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 278 1.000 Inparanoid score I2905
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - mtm8736
orthoMCL 1 0.900 - - OOG6_100408
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1506
SonicParanoid 1 1.000 - - X80
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.840

Return to query results.
Submit another query.