DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip4 and Lipo4

DIOPT Version :9

Sequence 1:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_001310315.1 Gene:Lipo4 / 628236 MGIID:3779637 Length:398 Species:Mus musculus


Alignment Length:378 Identity:138/378 - (36%)
Similarity:220/378 - (58%) Gaps:16/378 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DSHLNTYSLIKKYGYPAENHTLETDDGYILTLHRIAR-----PGATPVLLV---HGLLDSSATWV 136
            ::|:|...:||.:.||:|.:.:.|||||||.::||..     ..:.|.::|   ||||.:...||
Mouse    28 EAHMNVSQIIKHWEYPSEEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLLATPGAWV 92

  Fly   137 MMGPNKGLGYLLYDQGYDVWMANVRGNTYSRKHVKYSTHHAKFWDFTFHEMGKHDIPATMDYILN 201
            ...|:..|.::|.|.||||||.:.||:|:::|||..:|...:||||:|.:|.|:|:|||:::||:
Mouse    93 SNLPDNSLAFILADAGYDVWMGSSRGSTWAKKHVTLNTDSKEFWDFSFDQMIKYDLPATINFILD 157

  Fly   202 STGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPVVNFLAEWHLSVSL 266
            .||..|::||||||||::.....:...:..:||.|...|||:..::|.:. :....:  :|:.:.
Mouse   158 KTGQKQIYYIGHSQGTLIAIGAFATNQKLAEKIKLNILLAPIYSVQHSKG-IARLTS--YLTPTT 219

  Fly   267 VLKLIGVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSPAG 331
            :..|.|..|||| ....|.....:||...:|.. |:.:|....|:...|||.:.|.|.|..:.||
Mouse   220 IKVLFGEKEFLP-TVVSSEVGAYVCDINLVTAG-CAAMIGSMGGYSPEQLNMSRLDVYVKLNLAG 282

  Fly   332 ASTKQMQHFGQLNRSGGFRQYDHGWLR-NHWIYGTIDPPSYHLENVRAKVALYYGQNDWLAPPED 395
            .|.|.:.|:.|:.|||..:.||.|... |...|....||.|::|:::...|::.|..|:|:.|||
Mouse   283 TSVKILIHYNQIRRSGILQAYDWGSSSLNMQHYNQTTPPVYNVEDMKVPTAMFTGLKDFLSDPED 347

  Fly   396 VEMLNRKLPNVVEKYLVDDKEFNHLDFIWGIDARELLWDRMLEIMRNHENSII 448
            ||:|..|:.|:.  ||....:|:|.|||||::|||.:.:.:|.|:|.::...|
Mouse   348 VEILKPKIHNLT--YLKTIPDFSHFDFIWGLNAREEVSEEILTILRKYDGDYI 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 135/366 (37%)
Abhydro_lipase 88..139 CDD:282003 22/58 (38%)
Abhydrolase_5 121..>253 CDD:289465 56/134 (42%)
Abhydrolase_5 <368..419 CDD:289465 19/50 (38%)
Lipo4NP_001310315.1 Abhydro_lipase 33..95 CDD:282003 22/61 (36%)
Abhydrolase_1 77..375 CDD:278959 112/304 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831864
Domainoid 1 1.000 104 1.000 Domainoid score I6695
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 278 1.000 Inparanoid score I2905
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - mtm8736
orthoMCL 1 0.900 - - OOG6_100408
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

Return to query results.
Submit another query.