DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip4 and CG17097

DIOPT Version :10

Sequence 1:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster
Sequence 2:NP_609429.1 Gene:CG17097 / 34461 FlyBaseID:FBgn0265264 Length:1087 Species:Drosophila melanogaster


Alignment Length:387 Identity:167/387 - (43%)
Similarity:239/387 - (61%) Gaps:15/387 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FKTPTFLGRSVAVDSNVRLENDVDPNIQEDSHLNTYSLIKKYGYPAENHTLETDDGYILTLHRIA 115
            ||||.:|               ...:|.:::.|.|..||:|||||:|.:.:.::|||.|.||||.
  Fly   707 FKTPNYL---------------TQEDILDNTKLTTVDLIEKYGYPSETNYVTSEDGYRLCLHRIP 756

  Fly   116 RPGATPVLLVHGLLDSSATWVMMGPNKGLGYLLYDQGYDVWMANVRGNTYSRKHVKYSTHHAKFW 180
            ||||.||||||||:.|||:||.:||..||.|:||.:||||||.|.|||.|||:::.......|:|
  Fly   757 RPGAEPVLLVHGLMASSASWVELGPKDGLAYILYRKGYDVWMLNTRGNIYSRENLNRRLKPNKYW 821

  Fly   181 DFTFHEMGKHDIPATMDYILNSTGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAF 245
            ||:|||:||.|:||.:|:||..|...::.|||||||:.||::|.||:|.|..|:.|||.|:|..:
  Fly   822 DFSFHEIGKFDVPAAIDHILIHTHKPKIQYIGHSQGSTVFFVMCSERPNYAHKVNLMQALSPTVY 886

  Fly   246 LKHCRSPVVNFLAEWHLSVSLVLKLIGVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTG 310
            |:..||||:.||..:....|::|.|:|.:|...|.:.|..|.:.||..:.:...||:...|:..|
  Fly   887 LQENRSPVLKFLGMFKGKYSMLLNLLGGYEISAKTKLIQQFRQHICSGSELGSSICAIFDFVLCG 951

  Fly   311 FDKLQLNETMLPVIVGHSPAGASTKQMQHFGQLNRSGGFRQYDHGWLRNHWIYGTIDPPSYHLEN 375
            ||....|.|:.|::..|:..|||.||:.|:.||.....|:::|||.:.|...|.:.:||:|:|..
  Fly   952 FDWKSFNTTLTPIVAAHASQGASAKQIYHYAQLQGDLNFQRFDHGAVLNRVRYESSEPPAYNLSQ 1016

  Fly   376 VRAKVALYYGQNDWLAPPEDVEMLNRKLPNVVEKYLVDDKEFNHLDFIWGIDARELLWDRML 437
            ..:||.|::|:.|||....||..|..:|||:||...|:.:.|:|.||....|.|.||:..:|
  Fly  1017 TTSKVVLHHGEGDWLGSTSDVIRLQERLPNLVESRKVNFEGFSHFDFTLSKDVRPLLYSHVL 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 159/350 (45%)
CG17097NP_609429.1 PLN02872 728..1079 CDD:215470 159/351 (45%)

Return to query results.
Submit another query.