DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip4 and Lipk

DIOPT Version :9

Sequence 1:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_017444545.1 Gene:Lipk / 294094 RGDID:1309724 Length:402 Species:Rattus norvegicus


Alignment Length:365 Identity:131/365 - (35%)
Similarity:205/365 - (56%) Gaps:21/365 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LIKKYGYPAENHTLETDDGYILTLHRI---------ARPGATPVLLVHGLLDSSATWVMMGPNKG 143
            :|..:|||.|.|.:.|:|||||..:||         |.|.|. |.|.|||:.|::.|:...||..
  Rat    41 IISYWGYPYERHDVVTEDGYILGTYRIPHGKGCSRKAVPKAV-VYLQHGLIASASNWICNLPNNS 104

  Fly   144 LGYLLYDQGYDVWMANVRGNTYSRKHVKYSTHHAKFWDFTFHEMGKHDIPATMDYILNSTGVSQL 208
            |.:||.|.|||||:.|.||||:||||::.|....::|.|:..||.|:|:|||::.||..:|..||
  Rat   105 LAFLLADSGYDVWLGNSRGNTWSRKHLRLSPKSPEYWAFSLDEMAKYDLPATINLILEKSGQKQL 169

  Fly   209 HYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPVVNFLAEWHLSVSLVL--KLI 271
            .|:||||||.:.:|..|..||...||.:...||||..:|:.:||:.........:|.::.  |:.
  Rat   170 FYVGHSQGTTIAFIAFSTNPELAKKIRMFFALAPVVTVKYTQSPMKKLTTLSRKAVKILFGDKMF 234

  Fly   272 GVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSPAGASTKQ 336
            ..|.:|  .:||:   ..:|:. .:.:::|||.:|..:|||...||.:.|.|.:..||||.|.:.
  Rat   235 STHTWL--EQFIA---TKVCNR-KLFRQLCSNFLFSLSGFDPQNLNMSRLDVYMAQSPAGTSVQN 293

  Fly   337 MQHFGQLNRSGGFRQYDHGWL-RNHWIYGTIDPPSYHLENVRAKVALYYGQNDWLAPPEDVEMLN 400
            |.|:.|...||..:.:|.|.. :|...:..:.||.|::..:|...|::.|..|.:|..:|.:.|.
  Rat   294 MLHWAQAVNSGQLQAFDWGNPDQNMMHFNQLTPPVYNISKMRVPTAMWSGGRDVVADEKDTKNLL 358

  Fly   401 RKLPNVVEKYLVDDKEFNHLDFIWGIDARELLWDRMLEIM 440
            .|:.|::  |..:...:||:||..|.||.:.::..::.:|
  Rat   359 PKVANLI--YYKEIPHYNHMDFYLGQDAPQEVYRDLITMM 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 131/365 (36%)
Abhydro_lipase 88..139 CDD:282003 24/59 (41%)
Abhydrolase_5 121..>253 CDD:289465 61/131 (47%)
Abhydrolase_5 <368..419 CDD:289465 13/50 (26%)
LipkXP_017444545.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335547
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 272 1.000 Inparanoid score I2916
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - mtm8975
orthoMCL 1 0.900 - - OOG6_100408
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X80
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.810

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