DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip4 and LOC100360690

DIOPT Version :9

Sequence 1:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster
Sequence 2:XP_006231366.1 Gene:LOC100360690 / 100360690 RGDID:2321667 Length:399 Species:Rattus norvegicus


Alignment Length:383 Identity:124/383 - (32%)
Similarity:205/383 - (53%) Gaps:30/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DSHLNTYSLIKKYGYPAENHTLETDDGYILTLHRI-------------ARPGATPVLLVHGLLDS 131
            ::::|...:|..:||.:|.|.:.|:|||||.:.||             .||   .|.|.|||..|
  Rat    29 EANMNVSQIISYWGYESEEHEVMTEDGYILLIFRIPHGKNENKSSHNTRRP---VVYLHHGLTVS 90

  Fly   132 SATWVMMGPNKGLGYLLYDQGYDVWMANVRGNTYSRKHVKYSTHHAKFWDFTFHEMGKHDIPATM 196
            :..|::..|:..|.:||.|.|::||:.|.||...:||||:......:||||:|:|..::|:||.:
  Rat    91 ADYWILDPPSNCLAFLLADAGFEVWLGNSRGTNNARKHVRLDPDSKEFWDFSFNEQIEYDLPAII 155

  Fly   197 DYILNSTGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPVVNFLAEWH 261
            .:|||.|..:|::|||||||..:.:...:..|:...||.:...|.||...|:. :.|...:|..|
  Rat   156 YFILNETRQTQIYYIGHSQGVYLAYAAFATNPQLAQKIKINFALGPVVITKYL-TGVFRTIAYIH 219

  Fly   262 LSVSLVLKLIGVHEFLPK---NEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPV 323
            .:|  :..:.|..:...|   |:.:    |.:|....|. ..|::::.:..|::...|||:.:.|
  Rat   220 PTV--IKTMFGEKDIFSKSNANDIL----RFLCHREQIA-TACTSLLIVLFGYNPGNLNESRIDV 277

  Fly   324 IVGHSPAGASTKQMQHFGQLNRSGGFRQYDHG-WLRNHWIYGTIDPPSYHLENVRAKVALYYGQN 387
            ...|.|||.|.:.:.||.|..|||.|:.||.| ...|...|....||.|::|:::.:.|::.|:.
  Rat   278 YSEHIPAGTSVRSILHFSQGIRSGLFQAYDWGSESLNVLHYNQSTPPIYNIEDMKVRTAMWSGER 342

  Fly   388 DWLAPPEDVEMLNRKLPNVVEKYLVDDKEFNHLDFIWGIDARELLWDRMLEIMRNHEN 445
            |.|..|:||:.|..|.||::  |......:||:|||.|.||...::.:::|.:...::
  Rat   343 DLLGDPKDVKNLAAKTPNLI--YHKKIPHYNHMDFILGKDAVVQVYRKIIEFINRDQS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 123/375 (33%)
Abhydro_lipase 88..139 CDD:282003 22/63 (35%)
Abhydrolase_5 121..>253 CDD:289465 50/131 (38%)
Abhydrolase_5 <368..419 CDD:289465 16/50 (32%)
LOC100360690XP_006231366.1 Abhydro_lipase 34..96 CDD:282003 22/64 (34%)
Abhydrolase_1 79..378 CDD:278959 105/311 (34%)
Abhydrolase_5 79..245 CDD:289465 59/175 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335546
Domainoid 1 1.000 102 1.000 Domainoid score I6668
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 272 1.000 Inparanoid score I2916
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - mtm8975
orthoMCL 1 0.900 - - OOG6_100408
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X80
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

Return to query results.
Submit another query.