DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrr47 and PIRL3

DIOPT Version :9

Sequence 1:NP_001260355.1 Gene:Lrr47 / 34449 FlyBaseID:FBgn0010398 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_563921.1 Gene:PIRL3 / 837855 AraportID:AT1G12970 Length:464 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrr47NP_001260355.1 LRR_8 154..211 CDD:290566
LRR_4 156..194 CDD:289563
leucine-rich repeat 156..178 CDD:275380
leucine-rich repeat 179..199 CDD:275380
leucine-rich repeat 201..228 CDD:275380
leucine-rich repeat 229..274 CDD:275380
leucine-rich repeat 275..298 CDD:275380
PIRL3NP_563921.1 leucine-rich repeat 163..185 CDD:275380
LRR <185..385 CDD:227223
leucine-rich repeat 186..208 CDD:275380
leucine-rich repeat 209..231 CDD:275380
leucine-rich repeat 232..254 CDD:275380
leucine-rich repeat 255..278 CDD:275380
leucine-rich repeat 279..301 CDD:275380
leucine-rich repeat 302..324 CDD:275380
leucine-rich repeat 325..349 CDD:275380
leucine-rich repeat 350..372 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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