DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrr47 and PIRL8

DIOPT Version :10

Sequence 1:NP_523539.2 Gene:Lrr47 / 34449 FlyBaseID:FBgn0010398 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_194335.2 Gene:PIRL8 / 828711 AraportID:AT4G26050 Length:383 Species:Arabidopsis thaliana


Alignment Length:241 Identity:78/241 - (32%)
Similarity:108/241 - (44%) Gaps:38/241 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 PQVRMVISKRSEYPIKGFP----------RTLKSLTINNSQLVKLSFEICTLRNLTKLDVSGNKL 189
            ||.:|  ::||...|.|..          :.:|:|.::...|..||.....|.:::|||:|.|.:
plant    30 PQKKM--TRRSVSAIDGGAAATAKEGDRRQNIKTLDLSGMSLASLSASSINLASISKLDLSNNNI 92

  Fly   190 TKIPSEL--GRLPLTSLHLGNNLLGTQNDWCWLRGTKLCQS-LGELDLSGNGLTYFPPPLVKFES 251
            .|||..|  ..|.|.:|.|.:|.|.|      |..:..|.| |..|::|||.|...|..:....|
plant    93 QKIPESLVARMLNLWALDLQSNQLKT------LPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRS 151

  Fly   252 LVSLNLNNNLLSRLPFAIR-RMKALRKLYVCSNELESLPSAVEDL-RIDLLDVWGNCFKEFNADA 314
            |..||.|.|.|:|||.||. .:..|.||.|.||:|..||::|..| .:.:||...|.......|.
plant   152 LEELNANFNELTRLPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDL 216

  Fly   315 AQQMYLQKA-ASNSPQPLWLLGARAVDKYMLPLSAGSIPAVLIDLI 359
            ...:.||.. .|.:.|.|          ..||.|.|    :||.|:
plant   217 ENLVNLQVLNVSQNFQHL----------TTLPYSVG----LLISLV 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrr47NP_523539.2 LRR <156..>290 CDD:443914 52/137 (38%)
leucine-rich repeat 156..178 CDD:275380 6/21 (29%)
leucine-rich repeat 179..199 CDD:275380 9/21 (43%)
leucine-rich repeat 201..228 CDD:275380 8/26 (31%)
leucine-rich repeat 229..274 CDD:275380 19/45 (42%)
leucine-rich repeat 275..298 CDD:275380 11/23 (48%)
PIRL8NP_194335.2 LRR 35..>280 CDD:443914 75/234 (32%)
leucine-rich repeat 84..105 CDD:275380 9/20 (45%)
leucine-rich repeat 106..128 CDD:275380 8/27 (30%)
leucine-rich repeat 129..151 CDD:275380 7/21 (33%)
leucine-rich repeat 152..175 CDD:275380 11/22 (50%)
leucine-rich repeat 176..198 CDD:275380 11/21 (52%)
leucine-rich repeat 199..221 CDD:275380 4/21 (19%)
leucine-rich repeat 222..246 CDD:275380 10/37 (27%)
leucine-rich repeat 247..269 CDD:275380 1/2 (50%)

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