DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrr47 and LRRC40

DIOPT Version :9

Sequence 1:NP_001260355.1 Gene:Lrr47 / 34449 FlyBaseID:FBgn0010398 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_060238.3 Gene:LRRC40 / 55631 HGNCID:26004 Length:602 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrr47NP_001260355.1 LRR_8 154..211 CDD:290566
LRR_4 156..194 CDD:289563
leucine-rich repeat 156..178 CDD:275380
leucine-rich repeat 179..199 CDD:275380
leucine-rich repeat 201..228 CDD:275380
leucine-rich repeat 229..274 CDD:275380
leucine-rich repeat 275..298 CDD:275380
LRRC40NP_060238.3 leucine-rich repeat 41..83 CDD:275380
LRR 1 83..104
LRR_8 84..140 CDD:316378
leucine-rich repeat 84..106 CDD:275380
LRR 2 106..127
leucine-rich repeat 107..129 CDD:275380
PLN00113 120..>577 CDD:331614
LRR 3 129..150
leucine-rich repeat 130..152 CDD:275380
LRR 4 152..173
leucine-rich repeat 153..175 CDD:275380
LRR 5 175..196
leucine-rich repeat 176..198 CDD:275380
LRR 6 198..219
leucine-rich repeat 199..221 CDD:275380
LRR 7 221..242
leucine-rich repeat 222..244 CDD:275380
LRR 8 244..265
leucine-rich repeat 245..266 CDD:275380
LRR 9 266..286
leucine-rich repeat 267..290 CDD:275380
LRR 10 290..311
leucine-rich repeat 291..313 CDD:275380
LRR 11 313..335
LRR 12 336..356
LRR 13 400..421
LRR 14 426..447
leucine-rich repeat 447..473 CDD:275380
LRR 15 450..472
LRR 16 473..494
leucine-rich repeat 474..496 CDD:275380
LRR 17 496..517
leucine-rich repeat 497..543 CDD:275380
LRR 18 519..540
LRR 19 543..564
leucine-rich repeat 544..566 CDD:275380
LRR 20 566..586
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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