DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrr47 and LRRC1

DIOPT Version :9

Sequence 1:NP_001260355.1 Gene:Lrr47 / 34449 FlyBaseID:FBgn0010398 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_060684.4 Gene:LRRC1 / 55227 HGNCID:14307 Length:524 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrr47NP_001260355.1 LRR_8 154..211 CDD:290566
LRR_4 156..194 CDD:289563
leucine-rich repeat 156..178 CDD:275380
leucine-rich repeat 179..199 CDD:275380
leucine-rich repeat 201..228 CDD:275380
leucine-rich repeat 229..274 CDD:275380
leucine-rich repeat 275..298 CDD:275380
LRRC1NP_060684.4 LRR 1 11..34
LRR_RI 33..232 CDD:238064
LRR 2 35..58
LRR_8 36..94 CDD:290566
leucine-rich repeat 38..60 CDD:275380
LRR 3 60..81
leucine-rich repeat 61..83 CDD:275380
LRR 4 83..105
leucine-rich repeat 84..106 CDD:275380
leucine-rich repeat 107..129 CDD:275380
LRR 5 107..126
LRR 6 127..149
LRR_8 129..186 CDD:290566
leucine-rich repeat 130..152 CDD:275380
LRR 7 150..172
leucine-rich repeat 153..175 CDD:275380
LRR 8 173..196
leucine-rich repeat 176..198 CDD:275380
LRR 9 198..218
leucine-rich repeat 199..221 CDD:275380
LRR 10 219..242
leucine-rich repeat 222..244 CDD:275380
LRR_8 225..278 CDD:290566
LRR 11 244..264
leucine-rich repeat 245..267 CDD:275380
LRR 12 265..288
LRR 13 290..310
leucine-rich repeat 291..313 CDD:275380
LRR 14 311..334
leucine-rich repeat 314..336 CDD:275380
LRR 15 336..356
LRR 16 357..380
leucine-rich repeat 360..381 CDD:275380
LRR 17 382..405
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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