DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrr47 and Lrrc58

DIOPT Version :10

Sequence 1:NP_523539.2 Gene:Lrr47 / 34449 FlyBaseID:FBgn0010398 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_796067.2 Gene:Lrrc58 / 320184 MGIID:2443542 Length:366 Species:Mus musculus


Alignment Length:285 Identity:67/285 - (23%)
Similarity:112/285 - (39%) Gaps:63/285 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 NLTKLDVSGNKLTKIPSELGRLP-LTSLHLGNNLLGTQNDW-CWLRGTKLCQSLGELDLSGNGLT 240
            :|..||||||.||.:..||..|. |.:|...||.||..... ..|..:.||:||..|:||||...
Mouse    64 HLQLLDVSGNSLTALGPELLTLSGLRTLLARNNRLGGPGSLPKGLAQSPLCRSLQVLNLSGNCFQ 128

  Fly   241 YFPPPLVKFESLVSLNLNNNLLSRLPFAIRRMKALRKLY-----------------------VCS 282
            ..|..|::..:|.:|:|..|.|..:|..|..:::|..||                       :|.
Mouse   129 ELPASLLELRALQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPPELANLPSLNYLVLCD 193

  Fly   283 NELESLPSAVEDLR-IDLLDVWGNCFKEFNADAAQQMYLQKAA--------------SNSPQPLW 332
            |:::|:|..:..|. :..|.:..|.......:....::|::.:              :..|..|.
Mouse   194 NKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLL 258

  Fly   333 LLGARAVDKYMLPLSAGSIPAVLIDLIREAPRCP---CG----ELCYAQRKEDLFQRVVQPKFIT 390
            .|.||.:....:..:...:|..|:..:..|..||   ||    :.|..|                
Mouse   259 ELAARTIKIRSISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQ---------------- 307

  Fly   391 VKNLTYSREHQIYADVVLCDSRCSA 415
            :|.:.:..::::.....||...||:
Mouse   308 IKFVDFCGKYRLPLMHYLCSPECSS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrr47NP_523539.2 LRR <156..>290 CDD:443914 43/136 (32%)
leucine-rich repeat 156..178 CDD:275380 67/285 (24%)
leucine-rich repeat 179..199 CDD:275380 11/19 (58%)
leucine-rich repeat 201..228 CDD:275380 9/27 (33%)
leucine-rich repeat 229..274 CDD:275380 15/44 (34%)
leucine-rich repeat 275..298 CDD:275380 8/46 (17%)
Lrrc58NP_796067.2 LRR 1 40..61
LRR <60..>242 CDD:443914 48/177 (27%)
LRR 2 64..86 11/21 (52%)
leucine-rich repeat 65..87 CDD:275380 12/21 (57%)
LRR 3 87..108 6/20 (30%)
leucine-rich repeat 88..116 CDD:275380 9/27 (33%)
LRR 4 116..138 9/21 (43%)
leucine-rich repeat 117..139 CDD:275380 8/21 (38%)
LRR 5 139..161 7/21 (33%)
leucine-rich repeat 140..162 CDD:275380 7/21 (33%)
LRR 6 162..184 3/21 (14%)
leucine-rich repeat 163..185 CDD:275380 3/21 (14%)
LRR 7 185..206 4/20 (20%)
leucine-rich repeat 186..208 CDD:275380 5/21 (24%)
LRR 8 208..229 2/20 (10%)
leucine-rich repeat 209..231 CDD:275380 2/21 (10%)
LRR 9 231..251 1/19 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..356
Blue background indicates that the domain is not in the aligned region.

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