DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lrr47 and Lrrd1

DIOPT Version :9

Sequence 1:NP_001260355.1 Gene:Lrr47 / 34449 FlyBaseID:FBgn0010398 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_766467.2 Gene:Lrrd1 / 242838 MGIID:3045299 Length:853 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrr47NP_001260355.1 LRR_8 154..211 CDD:290566
LRR_4 156..194 CDD:289563
leucine-rich repeat 156..178 CDD:275380
leucine-rich repeat 179..199 CDD:275380
leucine-rich repeat 201..228 CDD:275380
leucine-rich repeat 229..274 CDD:275380
leucine-rich repeat 275..298 CDD:275380
Lrrd1NP_766467.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78
LRR 1 133..157
leucine-rich repeat 139..159 CDD:275380
LRR 2 159..180
leucine-rich repeat 160..183 CDD:275380
LRR_8 183..240 CDD:290566
LRR 3 183..204
leucine-rich repeat 184..206 CDD:275380
LRR 4 206..227
leucine-rich repeat 207..229 CDD:275380
LRR 5 229..251
leucine-rich repeat 230..252 CDD:275380
LRR_8 251..309 CDD:290566
LRR 6 252..274
leucine-rich repeat 253..275 CDD:275380
LRR 7 275..297
leucine-rich repeat 276..298 CDD:275380
LRR 8 298..319
leucine-rich repeat 299..321 CDD:275380
LRR_RI 315..582 CDD:238064
LRR_8 320..378 CDD:290566
LRR 9 321..342
leucine-rich repeat 322..344 CDD:275380
LRR 10 344..365
leucine-rich repeat 345..367 CDD:275380
LRR_8 366..424 CDD:290566
LRR 11 367..388
leucine-rich repeat 368..390 CDD:275380
LRR 12 390..411
leucine-rich repeat 391..436 CDD:275380
LRR 13 413..435
LRR 14 436..457
LRR 15 459..481
leucine-rich repeat 460..482 CDD:275380
LRR_8 482..539 CDD:290566
LRR 16 482..503
leucine-rich repeat 483..505 CDD:275380
LRR 17 505..527
leucine-rich repeat 506..528 CDD:275380
LRR 18 528..549
LRR_8 551..606 CDD:290566
LRR 19 551..573
leucine-rich repeat 552..574 CDD:275380
LRR_4 573..612 CDD:289563
LRR 20 574..596
leucine-rich repeat 575..597 CDD:275380
LRR 21 597..618
leucine-rich repeat 598..620 CDD:275380
LRR 22 620..641
leucine-rich repeat 621..646 CDD:275380
LRR 23 646..668
leucine-rich repeat 647..669 CDD:275380
LRR 24 669..690
leucine-rich repeat 670..692 CDD:275380
LRR 25 692..713
LRR 26 715..736
leucine-rich repeat 716..736 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.