DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrr47 and LOC1274604

DIOPT Version :10

Sequence 1:NP_523539.2 Gene:Lrr47 / 34449 FlyBaseID:FBgn0010398 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_313752.4 Gene:LOC1274604 / 1274604 VectorBaseID:AGAMI1_007130 Length:356 Species:Anopheles gambiae


Alignment Length:307 Identity:71/307 - (23%)
Similarity:131/307 - (42%) Gaps:54/307 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 KGFPRTLKSLTINNSQLVKLSFEICTLRNLTKLDVSGNKLTKIPSELGRLPLTSLHLGNNLLGTQ 214
            |.....::::.:|:::|:::...:....||..||:|.|:|.::|..:.:..||:|.:.||||..:
Mosquito    41 KKLAEDIETVLLNHNKLIRVPLSLNDFTNLKVLDLSNNRLEELPEVITQCQLTTLIVKNNLLTDK 105

  Fly   215 NDWCWLRGTKLCQSLGELDLSGNGLTYFPPPLV-----------------------KFESLVSLN 256
            :....|.|. ....|.||:||||...:||..::                       |.::|..|:
Mosquito   106 SLPKSLLGA-AGHGLKELNLSGNRFAHFPEQVIELRSLKYLYLGGNQITNVSKDIWKLQNLQLLS 169

  Fly   257 LNNNLLSRLPFAIRRMKALRKLYVCSNELESLPSAVEDL-RIDLLDVWGNCFKEFNADAAQQMYL 320
            |..||::.:|..:..:..|..|.:|.|.||:||:::..| .:..|.:..|..:....:......|
Mosquito   170 LGGNLITEIPETVGLLNHLHALVLCDNLLEALPASIARLVNLKSLLLHKNRLRHLPREIITLRNL 234

  Fly   321 Q--------------KAASNSPQPLWLLGARAVDKYMLPLSAGSIPAVLIDLIREAPRC---PCG 368
            .              |..:.:|..|..|..|.|....:..:|..:|..||:.::.|..|   .|.
Mosquito   235 TELSLRDNPLVVRFVKDMTLNPPSLLELAGRTVKTCAIRYAAEDLPRTLIEYLQTANCCVNPNCK 299

  Fly   369 ELCYAQRKEDLFQRVVQPKFITVKNLTYSREHQIYADVVLCDSRCSA 415
            .:.:..|.|.:       ||:     .:..:::|.....||.|:|.|
Mosquito   300 GVFFDNRVEHI-------KFV-----DFCGKYRIPLLQYLCSSKCVA 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrr47NP_523539.2 LRR <156..>290 CDD:443914 42/156 (27%)
leucine-rich repeat 156..178 CDD:275380 2/21 (10%)
leucine-rich repeat 179..199 CDD:275380 7/19 (37%)
leucine-rich repeat 201..228 CDD:275380 9/26 (35%)
leucine-rich repeat 229..274 CDD:275380 16/67 (24%)
leucine-rich repeat 275..298 CDD:275380 9/23 (39%)
LOC1274604XP_313752.4 LRR 21..>244 CDD:443914 48/203 (24%)
leucine-rich repeat 47..69 CDD:275380 2/21 (10%)
leucine-rich repeat 70..91 CDD:275380 7/20 (35%)
leucine-rich repeat 92..117 CDD:275380 9/25 (36%)
leucine-rich repeat 119..141 CDD:275380 9/21 (43%)
leucine-rich repeat 142..164 CDD:275380 1/21 (5%)
leucine-rich repeat 165..187 CDD:275380 6/21 (29%)
leucine-rich repeat 188..210 CDD:275380 9/21 (43%)
leucine-rich repeat 211..233 CDD:275380 2/21 (10%)
leucine-rich repeat 18..46 CDD:275380 1/4 (25%)

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