DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6094 and mRF1

DIOPT Version :10

Sequence 1:NP_609416.1 Gene:CG6094 / 34446 FlyBaseID:FBgn0032261 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_609617.1 Gene:mRF1 / 34720 FlyBaseID:FBgn0032486 Length:392 Species:Drosophila melanogaster


Alignment Length:144 Identity:39/144 - (27%)
Similarity:65/144 - (45%) Gaps:15/144 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 LEITYSRSSGPGGQHVNTVNTKVDV------RFKVAQADWIPEQTRQKLLKVLANRITKDGYFYI 128
            |:|...|:||.|||||||.::.|.:      ....||::....:.|:..:|.|.:|:.:.....:
  Fly   241 LKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESV 305

  Fly   129 KSD--LTRSQQMNLADALEKLRTIIRSQEAVAPAPPSEETLEKLR-----RRQERAVRERLQLKR 186
            ::.  .|:..|....:..||:||....|:.:........||..|.     ..|...:.|:|||:.
  Fly   306 EASKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKLQLEH 370

  Fly   187 GRAQVK--ADRQGP 198
            .|.::|  .||..|
  Fly   371 RRERLKELLDRWEP 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6094NP_609416.1 PRK09256 65..200 CDD:181730 39/144 (27%)
mRF1NP_609617.1 PrfA 35..378 CDD:439986 36/136 (26%)

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