DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo31DF and Myh9

DIOPT Version :9

Sequence 1:NP_001188784.1 Gene:Myo31DF / 34445 FlyBaseID:FBgn0086347 Length:1011 Species:Drosophila melanogaster
Sequence 2:NP_037326.2 Gene:Myh9 / 25745 RGDID:3140 Length:1960 Species:Rattus norvegicus


Alignment Length:787 Identity:291/787 - (36%)
Similarity:438/787 - (55%) Gaps:69/787 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VQDFVLLDQVSMEKFMDNLRKRFQNGSIYTYIGEVCVSMNPYRQMNIYGPETIRKYKGRELFENA 73
            |:|...|..::....:.||::|:.:|.||||.|..||.:|||:.:.||..|.:..|||::..|..
  Rat    83 VEDMAELTCLNEASVLHNLKERYYSGLIYTYSGLFCVVINPYKNLPIYSEEIVDMYKGKKRHEMP 147

  Fly    74 PHLFAIADSAYRVLKQRQQDTCILISGESGAGKTEASKIIMKYIAAVTNA----QGQNEIERVKN 134
            ||::||.|:|||.:.|.::|..||.:|||||||||.:|.:::|:|.|.::    :.|.|:||   
  Rat   148 PHIYAITDTAYRSMMQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSHKSKKDQGELER--- 209

  Fly   135 VLIQSNAILETFGNAKTNRNDNSSRFGKYMDIEFDYKADPVGGIITNYLLEKSRVVQQQPGERNF 199
            .|:|:|.|||.||||||.:|||||||||::.|.||.....||..|..|||||||.::|...||.|
  Rat   210 QLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVNGYIVGANIETYLLEKSRAIRQAKEERTF 274

  Fly   200 HSFYQLLRGANDNELRQYELQKETGKYHYLNQGSMDI--LTEKSDYKGTCNAFKTLGFSTDEVQT 262
            |.||.||.||.:: |:...|.:...||.:|:.|.:.|  ..:|..::.|..|.:.:|...||...
  Rat   275 HIFYYLLSGAGEH-LKTDLLLEPYNKYRFLSNGHVTIPGQQDKDMFQETMEAMRIMGIPEDEQMG 338

  Fly   263 IWRTIAAVLHLGNVEF--QTIEDELVISNKQHLKSTAKLLQVTETELSTALTKRVIAAGGNVMQK 325
            :.|.|:.||.|||:.|  :...|:..:.:....:..:.||.:..|:.:..:....|..|.:.:||
  Rat   339 LLRVISGVLQLGNIVFKKERNTDQASMPDNTAAQKVSHLLGINVTDFTRGILTPRIKVGRDYVQK 403

  Fly   326 DHNATQAEYGKDALAKAIYDRLFTWIISRINRAILFRGSKTQARFNSVIGVLDIYGFEIFDSNSF 390
            .....||::..:|||||.|:|:|.|::.|||:|:    .||:.:..|.||:|||.||||||.|||
  Rat   404 AQTKEQADFAIEALAKATYERMFRWLVLRINKAL----DKTKRQGASFIGILDIAGFEIFDLNSF 464

  Fly   391 EQFCINYCNEKLQQLFIELVLKQEQEEYQREGIEWTNIEYFNNKIIC-DLVEQP--HKGIIAIMD 452
            ||.||||.||||||||...:...||||||||||||..|::..:...| ||:|:|  ..||:|::|
  Rat   465 EQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIDLIEKPAGPPGILALLD 529

  Fly   453 EACLSVGKVTDDTLLGAMDKNLSKHPHYTSRQLKPTDKELKHREDFRITHYAGDVIYNINGFIEK 517
            |.|. ..|.||.:.:..:.:....||.:.    ||  |:||.:.||.|.||||.|.|..:.::.|
  Rat   530 EECW-FPKATDKSFVEKVVQEQGTHPKFQ----KP--KQLKDKADFCIIHYAGKVDYKADEWLMK 587

  Fly   518 NKDTLYQDFKRLLHNSKDANLSEMWPE-------------------GAQDIKKTTKRPLTAGTLF 563
            |.|.|..:...|||.|.|..:||:|.:                   ||...:|...|  |.|.|:
  Rat   588 NMDPLNDNIATLLHQSSDKFVSELWKDVDRIIGLDQVAGMSETALPGAFKTRKGMFR--TVGQLY 650

  Fly   564 QRSMADLVVTLLKKEPFYVRCIKPNDLKSSTVFDEERVEHQVRYLGLLENLRVRRAGFVHRQRYD 628
            :..:|.|:.||....|.:||||.||..|.:...|...|..|:|..|:||.:|:.|.||.:|..:.
  Rat   651 KEQLAKLMATLRNTNPNFVRCIIPNHEKKAGKLDPHLVLDQLRCNGVLEGIRICRQGFPNRVVFQ 715

  Fly   629 KFLLRYKMISQYTWPNFRAGSDRDGVR---VLIEEKKFAQDV-KYGHTKIFIRSPRTLFALEHQR 689
            :|..||::::    ||.......||.:   ::|:..:...:: :.|.:|:|.|: ..|..||.:|
  Rat   716 EFRQRYEILT----PNSIPKGFMDGKQACVLMIKALELDSNLYRIGQSKVFFRA-GVLAHLEEER 775

  Fly   690 NEMIPHIVTLLQKRVRGWIVRRNFKKMKAAITIVRAYK----AY-KLRSY--------VQELANR 741
            :..|..::...|...||::.|:.|.|.:..:|.::..:    || :||::        |:.|.|.
  Rat   776 DLKITDVIIGFQACCRGYLARKAFAKRQQQLTAMKVLQRNCAAYLRLRNWQWWRLFTKVKPLLNS 840

  Fly   742 LRKAKQM 748
            :|...::
  Rat   841 IRHEDEL 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo31DFNP_001188784.1 MYSc 6..690 CDD:214580 274/714 (38%)
MYSc_Myo1 21..677 CDD:276829 267/689 (39%)
Myosin_TH1 801..983 CDD:283635
Myh9NP_037326.2 Myosin_N 29..68 CDD:397036
Motor_domain 95..764 CDD:419868 267/689 (39%)
Myosin_tail_1 842..1921 CDD:396244 1/6 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.