DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo31DF and Myo5b

DIOPT Version :10

Sequence 1:NP_523538.1 Gene:Myo31DF / 34445 FlyBaseID:FBgn0086347 Length:1011 Species:Drosophila melanogaster
Sequence 2:XP_008770307.1 Gene:Myo5b / 25132 RGDID:621347 Length:1854 Species:Rattus norvegicus


Alignment Length:1051 Identity:318/1051 - (30%)
Similarity:495/1051 - (47%) Gaps:193/1051 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GVQDFVLLDQVSMEKFMDNLRKRF-QNGSIYTYIGEVCVSMNPYRQMNIYGPETIRKYKGRELFE 71
            |..|...|..:.....:.||:.|| ::..||||.|.|.|::|||.|:.|||.:.|..|.|:.:.:
  Rat    78 GENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYGQDVIYAYSGQNMGD 142

  Fly    72 NAPHLFAIADSAYRVLKQRQQDTCILISGESGAGKTEASKIIMKYIAAVTNAQGQNEIERVKNVL 136
            ..||:||:|:.||:.:.:.:::..|::|||||||||.::|..|:|.|.|..:.....||   ..:
  Rat   143 MDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGSASDTNIE---EKV 204

  Fly   137 IQSNAILETFGNAKTNRNDNSSRFGKYMDIEFDYKADPVGGIITNYLLEKSRVVQQQPGERNFHS 201
            :.|:.|:|..|||||.|||||||||||::|.||.|...:|..:..|||||||||.|...|||:|.
  Rat   205 LASSPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKKYHIIGANMRTYLLEKSRVVFQADDERNYHI 269

  Fly   202 FYQLLRGANDNELRQYELQKETGKYHYLNQGSMDI--LTEKSDYKGTCNAFKTLGFSTDEVQTIW 264
            ||||...|:..|.::..|......::..:.|:..|  :.:..|::.|..|...||.......:|:
  Rat   270 FYQLCAAASLPEFKELALTCAEDFFYTAHGGNTTIEGVDDAEDFEKTRQALTLLGVRESHQISIF 334

  Fly   265 RTIAAVLHLGNVEFQTIEDE---LVISNKQHLKSTAKLLQVTETELSTALTKRVIAAGGNVMQKD 326
            :.||::||||:||.|...|.   .:....:||.:..:||.:..:::...|..|.:........|.
  Rat   335 KIIASILHLGSVEIQAERDGDSCSISPQDEHLSNFCRLLGIEHSQMEHWLCHRKLVTTSETYVKT 399

  Fly   327 HNATQAEYGKDALAKAIYDRLFTWIISRINRAILFRGSKTQARFNSVIGVLDIYGFEIFDSNSFE 391
            .:..|....::||||.||.:||:||:..||:|:     :|..:.:|.||||||||||.|:.||||
  Rat   400 MSLQQVVNARNALAKHIYAQLFSWIVEHINKAL-----QTSLKQHSFIGVLDIYGFETFEINSFE 459

  Fly   392 QFCINYCNEKLQQLFIELVLKQEQEEYQREGIEWTNIEYFNNKIICDLVEQPHKGIIAIMDEACL 456
            ||||||.||||||.|...|.|.|||||.:|.|.||.|::::|:...||:| ...||:.::||.| 
  Rat   460 QFCINYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIE-AKLGILDLLDEEC- 522

  Fly   457 SVGKVTDDTLLGAMDKNLSKHPHYTSRQLKPTDKELKHREDFRITHYAGDVIYNINGFIEKNKDT 521
            .|.|.||......:.:..|...|:...::..|        .|.:.|:|..|.|..:||:|||:||
  Rat   523 KVPKGTDQNWAQKLYERHSNSQHFQKPRMSNT--------AFIVIHFADKVEYLSDGFLEKNRDT 579

  Fly   522 LYQDFKRLLHNSKDANLSEMWPEGAQDIKKT--------------TKRPL----------TAGTL 562
            :|::...:|..||...:::::.:....:..|              :.|||          :.|..
  Rat   580 VYEEQINILKASKFPLVADLFRDDKDSVPATNTAKSRSSSKINVRSSRPLMKAPNKEHKKSVGYQ 644

  Fly   563 FQRSMADLVVTLLKKEPFYVRCIKPNDLKSSTVFDEERVEHQVRYLGLLENLRVRRAGFVHRQRY 627
            |:.|:..|:.||....|.|||||||||.|....||.:|...|:|..|:||.:|:..||:..|..|
  Rat   645 FRTSLNLLMETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTY 709

  Fly   628 DKFLLRYKMISQYTWPNFRAGSDRDGV--RVLIEEKKFAQDVKYGHTKIFIRSPRTLFALEHQRN 690
            ..|..||:::.:..  .....:|:..:  .||....|.....::|.||||.|:.:..: ||..|.
  Rat   710 HDFFNRYRVLMKKR--ELANTTDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAY-LEKLRA 771

  Fly   691 EMIPHIVTLLQKRVRGWIVRRNFKKMKAA-ITIVRAYKAYKLRSYVQELANRLRKA----KQMRD 750
            :.......::||.||||:.|..:::::|| :|:.|..:.|..|...:.| .|.|.|    ||.| 
  Rat   772 DKFREATIMIQKTVRGWLQRVKYRRLRAATLTLQRFCRGYLARRLTEHL-RRTRAAIVFQKQYR- 834

  Fly   751 YGKSIQWPQPPLAGRKVEAKLHRMFDFWRANMILHKYPRSEWPQLRLQIIAATALAGRRPYWGQA 815
                      .|..|:...::.      ||.:|:..|.|              |:..||.|    
  Rat   835 ----------MLKARRAYCRVR------RAAVIIQSYTR--------------AMCVRRSY---- 865

  Fly   816 RRWVGDYLANSQENSGYEAYNGSIKNIRNHPADGETFQQVLF---SSFVKKF-------NHFNKQ 870
                                                 :|||.   ::.::|:       .||.:|
  Rat   866 -------------------------------------RQVLTEHKATIIQKYARGWMARRHFQRQ 893

  Fly   871 ANRAFIV---------------------SDSTIHKLD-GIKNKFKDMKRTI------------KI 901
            .:.|.::                     |...:.:|: |::||...::|.|            ::
  Rat   894 RDAAIVIQCAFRRLKARQALKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQL 958

  Fly   902 RELTS---ISVSPGRDQLIVFHSSKNKDLVFSLESEYTPLK--------EDRIGEVVGIVCKKYH 955
            ..:||   :.|...:.:|..:..::..|....|:.|...|:        |.|       |.:..|
  Rat   959 SAVTSTHAMEVEKLKKELARYQQNQEADPSLQLQEEVQSLRTELQKAHSERR-------VLEDTH 1016

  Fly   956 DLTGTELRVNV 966
            :....|||..|
  Rat  1017 NRENGELRKRV 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo31DFNP_523538.1 MYSc_Myo1 21..677 CDD:276829 249/687 (36%)
Myosin_TH1 801..977 CDD:461801 35/221 (16%)
Myo5bXP_008770307.1 MYSc_Myo5 91..759 CDD:276831 249/687 (36%)
IQ 773..795 CDD:197470 7/21 (33%)
IQ 821..842 CDD:197470 8/31 (26%)
IQ 871..891 CDD:197470 2/19 (11%)
SMC_prok_B 906..>1268 CDD:274008 23/129 (18%)
Myo5b_CBD 1480..1851 CDD:271261
Blue background indicates that the domain is not in the aligned region.

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