DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo31DF and myo1f

DIOPT Version :9

Sequence 1:NP_001188784.1 Gene:Myo31DF / 34445 FlyBaseID:FBgn0086347 Length:1011 Species:Drosophila melanogaster
Sequence 2:XP_002938604.1 Gene:myo1f / 100493342 XenbaseID:XB-GENE-5909751 Length:1095 Species:Xenopus tropicalis


Alignment Length:992 Identity:358/992 - (36%)
Similarity:532/992 - (53%) Gaps:149/992 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 REAGVQDFVLLDQVSMEKFMDNLRKRFQNGSIYTYIGEVCVSMNPYRQMNIYGPETIRKYKGREL 69
            :::||.|.|||.:::.:..::||:||:.:..|:||||.|.:|:||::||..:....|..|:|...
 Frog    15 KQSGVDDMVLLSKITEDAIVENLKKRYLDDYIFTYIGSVLISVNPFKQMPYFTEREIELYQGAAQ 79

  Fly    70 FENAPHLFAIADSAYRVLKQRQQDTCILISGESGAGKTEASKIIMKYIAAVTNAQGQNEIERVKN 134
            :||.||::|:.|:.||.:....::.|::||||||||||.|:|.||.||:.|:.  |.::::.||:
 Frog    80 YENPPHIYALTDNMYRNMLIDGENQCVIISGESGAGKTVAAKYIMGYISKVSG--GGSKVQHVKD 142

  Fly   135 VLIQSNAILETFGNAKTNRNDNSSRFGKYMDIEFDYKADPVGGIITNYLLEKSRVVQQQPGERNF 199
            :::|||.:||.||||||.||:||||||||.:|:|....:|.||.|:|:||||||||.|...||||
 Frog   143 IILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVSQNENERNF 207

  Fly   200 HSFYQLLRGANDNELRQYELQKETGKY-HYLNQG---SMDILTEKSDYKGTCNAFKTLGFSTDEV 260
            |.||||:.||:| |.|| .|...|..| .||||.   .::...:|.|:.....|...:|.|.:|.
 Frog   208 HVFYQLIEGASD-EQRQ-NLGIMTPDYFFYLNQSETYKVEGTNDKKDFYEMLEAMMVIGVSAEEQ 270

  Fly   261 QTIWRTIAAVLHLGNVEFQTIEDELVISNKQHLKSTAKLLQVTETELSTALTKRVIAA--GG--N 321
            |.:.:..|.:|||||:.||...:...:.....|...|.||.|.:..|:..||.|.:.:  ||  .
 Frog   271 QMVLQISAGILHLGNISFQEQGNYAKVECPDLLDFPAYLLGVQKGRLNDKLTSRKMDSKWGGRSE 335

  Fly   322 VMQKDHNATQAEYGKDALAKAIYDRLFTWIISRINRAILFRGSKTQARFNSVIGVLDIYGFEIFD 386
            .:....|..||.|.:|||:||:|.|:|.:::..||:|:    .|....::  ||||||||||||.
 Frog   336 SITVTLNVEQASYTRDALSKALYARVFDFLVESINKAM----QKPYEEYS--IGVLDIYGFEIFQ 394

  Fly   387 SNSFEQFCINYCNEKLQQLFIELVLKQEQEEYQREGIEWTNIEYFNNKIICDLVEQP--HKGIIA 449
            .|.|||||||:.||||||:||||.||.|||||..|||.||.||||||||:|||:|..  ..||::
 Frog   395 KNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVAEGIRWTPIEYFNNKIVCDLIENKLNPPGIMS 459

  Fly   450 IMDEACLSV---GKVTDDTLLGAMDKNLSKHPHYTSRQLKPTDKELKHREDFRITHYAGDVIYNI 511
            ::|:.|.::   |...|.|||..:...:..|.|:::..|           .|.|.||||.|.|.:
 Frog   460 VLDDVCATMHATGGGADQTLLQKLQAAVGTHEHFSNWNL-----------GFVIHHYAGKVSYYV 513

  Fly   512 NGFIEKNKDTLYQDFKRLLHNSKDANLSEMWPEGAQDIKKTTKRPLTAGTLFQRSMADLVVTLLK 576
            .||.|:|:|.|:.|...|:.:|:...:..::||.....||:  ||.|||:..::...|||.||:|
 Frog   514 EGFCERNRDVLFIDLIELMQSSEYQFIQSLFPERLDSDKKS--RPTTAGSKIKKQANDLVNTLMK 576

  Fly   577 KEPFYVRCIKPNDLKSSTVFDEERVEHQVRYLGLLENLRVRRAGFVHRQRYDKFLLRYKMISQYT 641
            ..|.|:||||||:.|....::|.||:|||.||||.||:|||||||.:|:.::|||.||.:::|.|
 Frog   577 CTPHYIRCIKPNETKKPKDWEESRVKHQVEYLGLKENIRVRRAGFAYRRVFNKFLQRYAILTQET 641

  Fly   642 WPNFRAGSDRDGVRVLIEEKKFAQD-VKYGHTKIFIRSPRTLFALEHQRNEMIPHIVTLLQKRVR 705
            ||.:| |.:|.||:.|:.......| .:.|.:|:|:::|.:||.||..|..........:||..|
 Frog   642 WPRWR-GDERQGVQHLLRSVNMDSDQYQMGKSKVFVKNPESLFLLEEMRERKFDTFARTIQKAWR 705

  Fly   706 GWIVRRNFKKMKAAITIVRAYKAYKLRSYVQELANRLRKAKQMRDYGKSIQWPQPPLAGRKVEAK 770
            .:|.||.:::|:                  :|.:|.|...|:.                      
 Frog   706 RYIARRKYEQMR------------------EEASNILYGYKER---------------------- 730

  Fly   771 LHRMFDFWRANMILHKYPRSEWPQLRLQIIAATALAGRRPYWGQARRWVGDYLANSQENSGYEAY 835
                    |.|.|                               .|.:|||||.....       
 Frog   731 --------RRNSI-------------------------------NRNFVGDYLGMEDR------- 749

  Fly   836 NGSIKNIRNHPADGETFQQVLFSSFVKKFNHFNKQANRAFIVSDSTIH-------KLDGIKNKFK 893
                ..:|......|   ::.|:..|.|::...|...|..|:|...::       |....|.:.|
 Frog   750 ----PELRQFMTKRE---RIDFADSVSKYDRRFKSIKRDLILSPKYLYLIGREKVKKGPEKGQIK 807

  Fly   894 D-MKRTIKIRELTSISVSPGRDQLIVFHSSKNKDLVFSLESEYTPLKEDRIGEVVGIVCKKYHDL 957
            : :|:.::|..:.|||:|..:|...:.....:..|   :||.:..       |.:.::||:|.::
 Frog   808 EILKKKVEIMNIQSISLSTRQDDFFILQEVDHDTL---MESVFKT-------EFISLMCKRYEEI 862

  Fly   958 TGTELRVNVTTNISCRL 974
            |..:||:|.|..:..|:
 Frog   863 TSRKLRLNFTDTLQLRV 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo31DFNP_001188784.1 MYSc 6..690 CDD:214580 305/697 (44%)
MYSc_Myo1 21..677 CDD:276829 294/669 (44%)
Myosin_TH1 801..983 CDD:283635 38/182 (21%)
myo1fXP_002938604.1 MYSc_Myo1 31..677 CDD:276829 294/669 (44%)
Myosin_TH1 717..915 CDD:368706 45/266 (17%)
PHA03378 <958..>1041 CDD:223065
SH3_MyoIe_If_like 1042..1094 CDD:212761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D122881at2759
OrthoFinder 1 1.000 - - FOG0000187
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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