DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog4 and Cog4

DIOPT Version :9

Sequence 1:NP_609413.1 Gene:Cog4 / 34442 FlyBaseID:FBgn0032258 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_001101919.1 Gene:Cog4 / 361407 RGDID:1310549 Length:785 Species:Rattus norvegicus


Alignment Length:776 Identity:304/776 - (39%)
Similarity:474/776 - (61%) Gaps:45/776 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EQVDETLQRIADEEAKVNEKLESLLAKQCQIEAKMSGIGRSLSLLHTVDSDSNKLNDQIVNTAQL 80
            ::::...:|:..||..|.::|::||.:|..||:||..:.|....|..::.|:.:|...|..|..|
  Rat    40 QELEAVYERLCGEEKVVEKELDALLEQQNTIESKMVTLHRMGPNLQLIEGDAKQLAGMITFTCNL 104

  Fly    81 AESVSAKVRRLDLARCRASECQQRVHDLIDLHLCSQGVVKAIGEEDYEKSATHIARFLAMDQQLL 145
            ||:||:|||:||||:.|..:..||..|::||..|..||..|:..||||::|.||.|:|.:|:.::
  Rat   105 AENVSSKVRQLDLAKNRLYQAIQRADDILDLKFCMDGVQTALRSEDYEQAAAHIHRYLCLDKSVI 169

  Fly   146 RRTADDVQGSITSVSDAVKTLEDATEKTRVLIAKRFDEAVKADDLASVERFFKIFPLVGCHRTGI 210
            ..:....:||:...:  :|.|::|.::.:.::|::|..|.|..||..||||||||||:|.|..|:
  Rat   170 ELSRQGKEGSMIDAN--LKLLQEAEQRLKAIVAEKFAAATKEGDLPQVERFFKIFPLLGLHEDGL 232

  Fly   211 EKFSLYICQKLANKAQKELRNAQDIAKAESRLQLAYADRLTAILENFARVVEVNQPIIEAFYGQA 275
            .|||.|:|:::|:||::.|........::.|..:.:||.||.:.|..||:||.:|||:|.:||  
  Rat   233 SKFSEYLCKQVASKAEENLLLVLGSDMSDRRAAVIFADTLTLLFEGIARIVETHQPIVETYYG-- 295

  Fly   276 SSSLIDMVSILQHECDTEVKNLLMEFNKNRQI--QYRSKQVNESTQRSAGGGNLGSNSIQALGHY 338
            ...|..::..||.||||:|:.::.:|.|.|..  |:|..|           .||..||       
  Rat   296 PGRLFTLIKYLQVECDTQVEKVVNKFIKQRDYHQQFRLVQ-----------SNLMRNS------- 342

  Fly   339 RKPSGGSVDKLNPKEIDAIIAEITVMHARVELYFRFMRRRLQVHVE---TCVPEKEQFDIMERYE 400
                  :.:|:.|:|:|.::.|:|:|:||.|||.||:|:|:....|   :...|:.:.:..:..:
  Rat   343 ------ATEKIEPRELDPVLTEVTLMNARSELYLRFLRKRISADFEVGDSMASEEVKQEHQKCLD 401

  Fly   401 KIMKNSDLRRQMQEILSTYLLLERYFMEESVLKAIGLDTYESGQQCSSMVDDVFFILRKSIRRAL 465
            |::.|..|...|||::..|:.:|.|||.|:|.||:.|||||.||..||||||||:|::|.|.|||
  Rat   402 KLLNNCLLSCTMQELVGFYITMEEYFMRETVNKAVALDTYEKGQLTSSMVDDVFYIVKKCIGRAL 466

  Fly   466 TTQSINGTCAVINNVAACLDGDFVNALKAPLKSGYPSGYID-----LAQAYNAIQTSLQQGKLHS 525
            ::.:|:..||:||.....|:.||.:.|...|:.|:|:..:.     :..|.|.:.:||||||..:
  Rat   467 SSSNIDCLCAMINLATRELEADFRDVLCNKLRMGFPATTLQDIQRGVTSAVNIMHSSLQQGKFDT 531

  Fly   526 ---SDADRGRANFLVQLNNADISTEYIETLCQTMEQEIAGTFPQTTQVERQM--LDSCLTELKAV 585
               ...|..:.:|||.|||.::.:|.|.||.:|:|.:....|.|....|:..  .||||::|.||
  Rat   532 KGIESTDEAKLSFLVTLNNVEVCSENISTLKKTLESDCTKLFSQGIGGEQAQAKFDSCLSDLAAV 596

  Fly   586 RDALKATVDFGMQQLRSSVIKPRLNPWINQFLNYSHNLNEEELAAYEAGETFVQFFIVQLDGLLN 650
            .:..:..:..|:.:|.||.:||::.||||.||:.||::.|||...|||.:.:||.||:.|:..:.
  Rat   597 SNKFRDLLQEGLAELNSSAVKPQVQPWINTFLSVSHSIEEEEFNDYEANDPWVQQFILSLEQQMA 661

  Fly   651 SFKNSLSPRNYDALVSILATEVTIQLERAIKKISFNRLGGLVLDQEVRALGSYLTGATSWSVRDK 715
            .||.||||..||:|..::.:.|.::||:.:.|.:|||||||..|:|:|:|.:|||..|:|::|||
  Rat   662 EFKASLSPVIYDSLTGLMTSLVAVELEKVVLKSTFNRLGGLQFDKELRSLIAYLTTVTTWTIRDK 726

  Fly   716 MTRISQIATLLNLDKITELSEYWNPENNKEMSSWHLTPNEVRTFLTLRNDFRIEDIKRLQL 776
            ..|:||:||:|||:::||:.:||..  |....:|.|||.|||..|.||.|||.||||||:|
  Rat   727 FARLSQMATILNLERVTEILDYWGA--NSGPLTWRLTPAEVRQVLALRIDFRNEDIKRLRL 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog4NP_609413.1 Cog4 166..497 CDD:214809 127/335 (38%)
Cog4NP_001101919.1 COG4 188..497 CDD:400560 120/313 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341935
Domainoid 1 1.000 232 1.000 Domainoid score I2342
eggNOG 1 0.900 - - E1_KOG0412
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7155
Inparanoid 1 1.050 551 1.000 Inparanoid score I1088
OMA 1 1.010 - - QHG54204
OrthoDB 1 1.010 - - D139188at33208
OrthoFinder 1 1.000 - - FOG0004935
OrthoInspector 1 1.000 - - oto98243
orthoMCL 1 0.900 - - OOG6_102876
Panther 1 1.100 - - LDO PTHR24016
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4025
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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