DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog4 and CG43322

DIOPT Version :9

Sequence 1:NP_609413.1 Gene:Cog4 / 34442 FlyBaseID:FBgn0032258 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_609092.1 Gene:CG43322 / 33984 FlyBaseID:FBgn0263027 Length:359 Species:Drosophila melanogaster


Alignment Length:344 Identity:63/344 - (18%)
Similarity:119/344 - (34%) Gaps:113/344 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DIGTNEQVDETLQRIADEEAKVNEKLESLLAK-QCQIEAKMSGIGRSLSLLHTVDSDSNKLNDQI 74
            |.||.|...|..|:: ||..:|   |:...|| :..|:....| .....:.||.......|:::.
  Fly    60 DSGTEEASAERFQQV-DEAFRV---LQEKFAKGRRNIQEDEEG-AMEFDIKHTAPQHRQYLSNEG 119

  Fly    75 VNTAQLAESVSAKVRRLDLARCRASECQQRVHDLIDLHLCSQGVVKAIGEED-YEKSATHIARFL 138
            :......:      |:....:.||.:.|:||.:    |...:.   |.||:. ..|..:|..:..
  Fly   120 IGVGTPFQ------RQKQYQQVRAMKAQERVLE----HRIDKA---AAGEKTLMSKGGSHFRKHA 171

  Fly   139 AMDQQLLRRTADDV------QGSITSVSDAVKTLEDATEKTRVL--------------------- 176
            ...:..:.|..:|:      :|...:::.:.|.|..|..:...|                     
  Fly   172 IKTKYGIDRVVEDLIQEAMSKGDFNNLNGSGKPLSSAQSQNPYLDFTTHKLNKIMLDNGFTPEWI 236

  Fly   177 -IAKRFDEAV--------------------KADDLASVERFFKIFPLVGCHRTG-------IEKF 213
             :.|...:|:                    :.||||:    :|||.|  .|:..       |:|:
  Fly   237 SLGKDIRDAIAQLKTKLRQERKYYGEWPLQRPDDLAA----WKIFTL--NHQDDVKQLNKLIDKY 295

  Fly   214 SLYI-----------CQKLANKAQKELRNAQDIAKAESRLQLAYADRLTAILENFARVVEVNQPI 267
            :|.:           ..::|....|:....:::.:.|.:      .:.::.|||           
  Fly   296 NLIVPILENQFFRLHLDRMAEPIFKDPELQRNVIRPEMK------SKPSSNLEN----------- 343

  Fly   268 IEAFYGQASSSLIDMVSIL 286
                .|.||:||..::|.|
  Fly   344 ----QGSASTSLFSLISKL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog4NP_609413.1 Cog4 166..497 CDD:214809 30/181 (17%)
CG43322NP_609092.1 DnaJ 29..84 CDD:197617 10/27 (37%)
PLN03085 <168..313 CDD:215566 21/150 (14%)
DUF1992 181..250 CDD:286440 8/68 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450315
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24016
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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